Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01235 ATGGAGGAAGCAAAAGGAGTGGTGAAGCACATTTTGCTGGTGAAGTTCAAAGACGACATCCCAGAAGACAAGATCGACGAAATCATCAAAGGCTATGCCAATCTCGTGAATCTCATCCCTCCGATGAAGTCTTTCCAGTGGGGCAAGGACGTGAGTTCTGAAAACTTGCATCAAGGTTTTACTCATATATTAGAATCAACCTTCGAGAGTACAGAAGGAGTTACAGAGTATTTAGTTCATCCTGCCCATGTTGAATTTGCAAAGCTGCAACTTTCTACCTTGGAGAAATTCCTTGTATTTGACTATAAGCCTACCATAGTTCgtctttg 329 0.4103 MEEAKGVVKHILLVKFKDDIPEDKIDEIIKGYANLVNLIPPMKSFQWGKDVSSENLHQGFTHILESTFESTEGVTEYLVHPAHVEFAKLQLSTLEKFLVFDYKPTIVRL 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01235 109 PANTHER - 1 108 IPR044662 -
Bva05g01235 109 ProSiteProfiles Stress-response A/B barrel domain profile. 8 102 IPR013097 -
Bva05g01235 109 SUPERFAMILY Dimeric alpha+beta barrel 8 105 IPR011008 -
Bva05g01235 109 Pfam Stress responsive A/B Barrel Domain 8 103 IPR013097 -
Bva05g01235 109 Gene3D - 1 109 - -
Bva05g01235 109 SMART Dabb_2 8 104 IPR013097 -
Bva05g01235 109 PANTHER STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN HS1 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01235 Bva-Chr5 6461636 6462434 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01235 - - cic:CICLE_v10006242mg 165.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01235 05 6461636 6462434 Bva05g01235 05 6461636 6462434 ECH