Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01233 ATGGCTGATCCCATTGTTAAATATTCCTATATCTCACTCctttttctggttttcttttcttgtgctCTCTCCGATGATTCACACCCGAATGTGAAAATACAAGACATTTGCGCAAAACACAGAAACGGTTCCTTCTGTTTAGCTGTTCTAAACTCGGAGACCAATGGTGCTGGTTCAGTTTCAGATCTTGTTGCTCTTGGCCAATCCACCATCGACTTGGCACGTGCCAGTGCTaccaaaaccctaaaccttatcAAAACGCTTATGAAAGAGCAGATGGATGACGCAAAGGCTCAAAAATACTACACAGAGTGTTCTGAGAGCTACGACGACGCTTTGGAAGACCTCGAGGAGGCTAGACAGAACTTGGTCTCTGGAGATCACAATGGCGCCAACCTTGCTGCATCAGCTGCCATGACCAACATTGATGAGTGTGATTCAGAGGCTCATGTGTGTGTCAGAATACTCGGAGGGAAATCTGTGAGTGCGCTAGAAGACGAAGGAGGAGATTTTGGCAGAGAAAATATGGAGGAAGCAAAAGGAGTTGTGAAGCACGTTTTGCTGGCGAAGTTCAAAGACGAAATCCCGCAAGACAAGATTGATGAACTGATCAAAGGCTATGCCAATCTCGTCAATCTCGTCCCTCCGATGAAGTCCTTCCATTGGGGCAAGGACGTGAGTGCTGAAAACTTGCATCAAGGTTTTACTCATGTGTTCGAATCAACCTTTGAGAGTACAGAAGGGGTTGCAGAGTATACAGCTCATCCTGCCCATGTTGAATTTGCAAACGTGTTCCTTGCTTCCTTGGAGAAGGTGATTGTGGTTGACTATAAGCCTACAATACTTCGTGTTTA 854 0.4333 MADPIVKYSYISLLFLVFFSCALSDDSHPNVKIQDICAKHRNGSFCLAVLNSETNGAGSVSDLVALGQSTIDLARASATKTLNLIKTLMKEQMDDAKAQKYYTECSESYDDALEDLEEARQNLVSGDHNGANLAASAAMTNIDECDSEAHVCVRILGGKSVSALEDEGGDFGRENMEEAKGVVKHVLLAKFKDEIPQDKIDELIKGYANLVNLVPPMKSFHWGKDVSAENLHQGFTHVFESTFESTEGVAEYTAHPAHVEFANVFLASLEKVIVVDYKPTILRV 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01233 284 Pfam Plant invertase/pectin methylesterase inhibitor 33 148 IPR006501 GO:0004857
Bva05g01233 284 Coils Coil 102 122 - -
Bva05g01233 284 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 147 IPR035513 -
Bva05g01233 284 SMART PMEI_2 28 189 IPR006501 GO:0004857
Bva05g01233 284 Pfam Stress responsive A/B Barrel Domain 183 278 IPR013097 -
Bva05g01233 284 SUPERFAMILY Dimeric alpha+beta barrel 183 280 IPR011008 -
Bva05g01233 284 ProSiteProfiles Stress-response A/B barrel domain profile. 183 277 IPR013097 -
Bva05g01233 284 PANTHER STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN HS1 176 282 - -
Bva05g01233 284 SMART Dabb_2 183 279 IPR013097 -
Bva05g01233 284 Gene3D - 176 284 - -
Bva05g01233 284 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 175 IPR035513 -
Bva05g01233 284 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Bva05g01233 284 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 147 IPR006501 GO:0004857
Bva05g01233 284 CDD PMEI 33 148 IPR034086 GO:0043086|GO:0046910
Bva05g01233 284 PANTHER - 176 282 IPR044662 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01233 Bva-Chr5 6457146 6460380 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01233 - - egr:104432610 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01233 05 6457146 6460380 Bva05g01233 05 6457146 6460380 ECH