Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01199 ATGAAGCAAGGGGCACCACCGCCCTCGCCACCACCGCCACCGCCGGCAATGACTGCAACAGCAAAGGGTAGGAGCAAGCCCATTGACAAGGTTCAGCAGAGTCTAACGCCATCTCGCTTCAGAGCTTCATCTAAAGCACCAAAATCACCAGAGGGTATCGATGGGGTATCTTCAGTAAGAGCCAGGTCTGTACCCCCTGACTTGAAGAACAAGGCCAAAAGGGCTCTTGTGGTGAACAAGCCTAAATCTGCTGAGGAGTCTCAAAGGGTTAGAGAAGGTGAGGAGGCTAAGGATCTGGGTCGCCGCCATGCCGTCGAAATATTTGCTCGCCCACGGCGGCGGTCTGCGGATTTCGGTTTGAGGAGGAGTGAAGATGACCCTGatgggaagaagaaggaattgCAGGAAAAGCTTGACTTGAGTGAGAATTTGATCAAGAACTTACAGTCTGAATTGCTGGCCTTGAAGGCTGAGTTGAATgaagttaaaagttttaacGTGGAGCTAGAGTCTCAGAACAAGAAGCTCAATGAAACTCTTGCTGCTGCCGAAGCTAAGATAACAGCTCTTTGCAATCGTGAAAAGAAGGAGACGATTGGAGAGCACCAGAATCCCAAATTTAAAGACATACAGAAACTCATTGCTGACAAATTGGAACGATCAACGATCAACAAGCAGGCTACCAGTGAAGCAATTTTTGTTAAAGCGCCATTTCCAGTACCAAAAGCCATACATGCCATTCCAGAAGGTACAATTAAAGGAAGAAAGCCTCCAGCCAGCCCATGTGCACCACCACCGCCTCCACCACTACCACCGCCACCACCGCCGCCCCCAATCCCTTCTCGACCTGCAGCAAAAGCAGCTAACAGCCAAAAGGCTCCTGCCCTTGCGGATTTGTTTCACTCCTTAAGAAAGctagaagggaaaaaagattCAATAGGCCCTGAATATCATCATAGACCAGCAGCTATTAGTGCACATAGTAGCATTGTTGGAGAAATCCAAAACCGTTCAGCACATCTTTTAGCAATAAAGGCAGACATTGCAACAAAAGGAGAGTTCATTAATGGCCTTATAAAGAAGGTGGTAAATGCAGCCTATGTTGATATAGAGGATGTCGTAAAGTTTGTAGATTGGTTTGATGGTGAACTCTCCTCATTGGCTGATGAGCGAGCTGTCTTGAAGCATTTTAACTGGCCTGAGAAGAAAGCTGATGCCCTGCGAGAAGCTGCAGTTGAGTATCGGGAGCTTAAATCATTAGAACAGGAGATTTCCTCCTACAAGGATGATCCTGACATTCCATGTGGCGTTGCCTTGAAAAAGATGGCCAGCTTATTAGATAAGTCTGAGCGAAGCATACAGAGGTTAATCAAGCTGAGAAATTCTGTCATGCGTTCATATCAAGAATACAAAATTCCAACTGCTTGGATGCTTGATTCGGGAATCATGGCCAAGATAAAGCAGGCTTCCATGACTCTGGTCAAGATGTATATGAAAAGAGTGACGCTGGAGCTTGAGTCCATTCAGAACTCAGACAAAATATCAAGTCAAGAATCTCTTTTGCTTCAGGGTGTGCATTTTGCTTATAGGGCTCATCAGTTTGCTGGAGGTCTGGACTCAGAAACACTGTGTGCCTTTGAAGACATTAGACAGCGTGTGCCAGCACACTTGGCGGGGTCTCGAGAACTCATAGCTGGCATACCTTCATCTTG 1712 0.4556 MKQGAPPPSPPPPPPAMTATAKGRSKPIDKVQQSLTPSRFRASSKAPKSPEGIDGVSSVRARSVPPDLKNKAKRALVVNKPKSAEESQRVREGEEAKDLGRRHAVEIFARPRRRSADFGLRRSEDDPDGKKKELQEKLDLSENLIKNLQSELLALKAELNEVKSFNVELESQNKKLNETLAAAEAKITALCNREKKETIGEHQNPKFKDIQKLIADKLERSTINKQATSEAIFVKAPFPVPKAIHAIPEGTIKGRKPPASPCAPPPPPPLPPPPPPPPIPSRPAAKAANSQKAPALADLFHSLRKLEGKKDSIGPEYHHRPAAISAHSSIVGEIQNRSAHLLAIKADIATKGEFINGLIKKVVNAAYVDIEDVVKFVDWFDGELSSLADERAVLKHFNWPEKKADALREAAVEYRELKSLEQEISSYKDDPDIPCGVALKKMASLLDKSERSIQRLIKLRNSVMRSYQEYKIPTAWMLDSGIMAKIKQASMTLVKMYMKRVTLELESIQNSDKISSQESLLLQGVHFAYRAHQFAGGLDSETLCAFEDIRQRVPAHLAGSRELIAGIPSS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01199 570 MobiDBLite consensus disorder prediction 258 283 - -
Bva05g01199 570 MobiDBLite consensus disorder prediction 250 291 - -
Bva05g01199 570 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 29 570 IPR040265 -
Bva05g01199 570 SUPERFAMILY Formin homology 2 domain (FH2 domain) 264 276 - -
Bva05g01199 570 MobiDBLite consensus disorder prediction 78 134 - -
Bva05g01199 570 MobiDBLite consensus disorder prediction 1 134 - -
Bva05g01199 570 MobiDBLite consensus disorder prediction 27 43 - -
Bva05g01199 570 Coils Coil 131 193 - -
Bva05g01199 570 Coils Coil 403 430 - -
Bva05g01199 570 MobiDBLite consensus disorder prediction 1 18 - -
Bva05g01199 570 PANTHER F11A17.16 29 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01199 Bva-Chr5 6223400 6230244 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01199 - - gmx:100820135 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01199 05 6223400 6230244 Bva06g00429 06 5208899 5212726 BWGD
Bva05g01199 05 6223400 6230244 Bva05g01199 05 6223400 6230244 ECH