Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01158 atgggGCTTGTGATAGTGAAAAGTGGTTTTGcgaaaacaacaaagaaaccACAGGAAGCCATCCCCTCTgttttcattcattcattcattcctCCTTCTCCTTACCCATCTCTATTTTGCGTTTACTCTGTTTCTATAGCAATGGCCGGCGACAGTTTGACCCATGTCCACAGTCTCCGTGAGAGGCTCGACGAGACTCTCAAAGCTCACAGAAACGAGATTTTGGCTCTTCTCTCAAGGATCGAAGCCAAGGGCAAGGGAATTCTGCAACACCACCAGGTCATTGCTGAGTTCGAAGAGATCCCAGAAGGAAACAGGCAGAAACTCATTGATGGGGCCTTTGGAGAAGTTCTGAGATCCACCCAGGAAGCTATAGTTTTGCCACCATGGGTTGCACTGGCTGTTCGTCCAAGGCCTGGTGTTTGGGAGTATCTGAGAGTGAACGTGCACGCTCTTGTCGTCGAGGAGCTGCGCGTTGCGGAGTACCTGCGCTTCAAGGAGGAACTTGTTGATGGGGGCTCCAATGGCAATTTTGTGCTCGAGCTCGATTTTGAGCCATTCAGTGCCTCTTTTCCCCGTCCAACTCTCAACAAGTCAATTGGAAATGGTGTTGAGTTCCTCAACCGCCACCTCTCTGCCAAGCTCTTCCATGACAAGGAGAGCATGGTCCCACTTCTGGAATTCCTCAAAGTTCACAGCGTCAAGGGAAAGACCTTGATGTTGAACGATAGAATTCAGAACTTGAATTCTCTTCAATATGTTCTGAGGAAAGCAGAGGAGTACCTTACCACACTTCCTCCTCAAACTCCCTACATTGAGTTCGAACACAAATTCCAGGAGATTGGACTGGAGAGAGGGTGGGGTGACACCGCCGAGCGTGTCCTGGAGATGATCCAGCTTCTCCTGGATCTTCTCGAGGCACCTGATCCTTGCACCCTTGAGACATTCCTCGGAAGAATCCCCATGGTCTTTAACGTTGTCATCCTTTCTCCCCATGGTTACTTCGCACAGGACAATGTCTTAGGATACCCTGATACCGGTGGCCAAGTTGTCTACATCTTGGATCAAGTTCGTGCTTTGGAGAATGAGATGCTCCAACGCATTAAGCAGCAAGGCTTAAACATCACCCCTCGTATTCTCATTATCACCCGTCTTCTTCCAGATGCAGTTGGAACCACCTGTGGCCAACGTCTTGAGAAAGTTTTCGGTACCGAGCACACCCACATTCTTCGTGTTCCCTTCAGAGATGAGAAGGGAATTATTCGCAGATGGATCTCAAGATTTGAAGTCTGGCCATACTTGGAAACTTACACTGagGATCTTGTCCATGAGCTTGCTGAGGAGTTGCAAGGCAAGCCAGATCTCATTGTTGGAAACTACAGTGATGGAAACATTGTTGCATCTCTGTTAGCTCACAAATTAGGTGTAACACAGTGTACCATTGCTCATGCACTTGAGAAGACCAAGTATCCTGACTCTGACATTTACtggaagaaatttgaagagaaaTATCACTTCTCATGCCAATTCACAGCTGATCTCTTCGCCATGAACCACACTGACTTTATCATCACCAGTACCTTCCAAGAGATTGCTGGAAGCAAGGACACTGTTGGACAGTATGAGAGCCACACTGCCTTCACCCTTCCCGGCCTTTATCGCGTTGTCCACGGTATCGATGTCTTCGATCCTAAGTTCAACATTGTCTCCCCTGGAGCTGACATGAGTGTCTACTTCCCATACACTGAAACCAGCAAGAGGTTGACATCTTTCCACCCCGAGATCGAAGAGCTTCTCTACAGCTCAGTGGAGAATGAGGAGCACATTTGCGTGTTGAAGGACCGCAACAAGCCAATCATCTTCACCATGGCAAGATTGGACCGTGTCAAGAACATCACCGGACTTGTCGAGTGGTACGGTAAGAATGCCCGCCTCCGTGAGCTGGTGAACCTTGTGGTTGTCGCCGGAGACAGGAGAAAGGAGTCCAAGGACTTGGAAGAGAAAGCtgagatgaagaaaatgtACGGCCTCATTGAGACCTACAAGTTGAATGGCCAATTCAGGTGGATTTCTTCTCAGATGAACAGAGTGAGGAACGGTGAGCTCTACCGTGTCATCTGTGACACCAAGGGAGCTTTTGTGCAGCCTGCTATCTACGAAGCTTTCGGTTTGACTGTCGTTGAGGCCATGACATGCGGTTTGCCAACCTTTGCTACCTGCAATGGTGGTCCTGCTGAGATCATTGTCCATGGAAAATCTGGATTCCACATTGACCCCTACCACGGCGACCGCGCCGCCGACACCCTCGTTGAGTTCTTTGAGAAGACAAAGGCAGACCCATCTTACTGGGAAACCATCTCCCAGGGTTGTATCAAGCGTATTCACGAGAAGTACACATGGCAAATCTACTCTCAGAGGCTTCTGACTCTCACCGGAGTCTATGGCTTCTGGAAGCATGTGTCCAACCTTGACCGCCGCGAGAGCCGCCGTTACCTTGAGATGTTCTATGCCCTCAAGTACCGCAAGTTGGCTGAGTCTGTTCCCCTCGCCACTGACGAGTA 2561 0.4799 MGLVIVKSGFAKTTKKPQEAIPSVFIHSFIPPSPYPSLFCVYSVSIAMAGDSLTHVHSLRERLDETLKAHRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEGNRQKLIDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEELRVAEYLRFKEELVDGGSNGNFVLELDFEPFSASFPRPTLNKSIGNGVEFLNRHLSAKLFHDKESMVPLLEFLKVHSVKGKTLMLNDRIQNLNSLQYVLRKAEEYLTTLPPQTPYIEFEHKFQEIGLERGWGDTAERVLEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLQRIKQQGLNITPRILIITRLLPDAVGTTCGQRLEKVFGTEHTHILRVPFRDEKGIIRRWISRFEVWPYLETYTEDLVHELAEELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSVYFPYTETSKRLTSFHPEIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAIYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADTLVEFFEKTKADPSYWETISQGCIKRIHEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLATDE 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01158 853 Pfam Sucrose synthase 56 600 IPR000368 GO:0005985|GO:0016157
Bva05g01158 853 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 342 810 - -
Bva05g01158 853 Coils Coil 853 853 - -
Bva05g01158 853 Gene3D - 193 322 - -
Bva05g01158 853 Gene3D Glycogen Phosphorylase B; 327 843 - -
Bva05g01158 853 PANTHER SUCROSE SYNTHASE 48 851 - -
Bva05g01158 853 Gene3D - 72 192 - -
Bva05g01158 853 PANTHER - 48 851 IPR012820 GO:0005985|GO:0016157
Bva05g01158 853 Gene3D Glycogen Phosphorylase B; 574 800 - -
Bva05g01158 853 Coils Coil 60 80 - -
Bva05g01158 853 Pfam Glycosyl transferases group 1 611 776 IPR001296 GO:0016757
Bva05g01158 853 TIGRFAM sucr_synth: sucrose synthase 71 849 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01158 Bva-Chr5 5976292 5981985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01158 46 853 Glycosyltransferase AT3G43190 83.787 0.0 1424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01158 K00695 - gmx:100788584 1498.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01158 05 5976292 5981985 Bva06g00476 06 5456579 5462864 BWGD
Bva05g01158 05 5976292 5981985 Bva05g01158 05 5976292 5981985 ECH