Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01132 ATGAAGGGAGGACTATATGGATTAAAGGGTAAAGAGATTGGCCTTATATCCATTGTTCTCATGTCTGCGACTATCATTATATGGTCATGGGAGAAAACCCCAGGCCTAACtttatttcttccttctcAAACACGGGTGCAACAATCATCAGATATTTTAATGAGGAGACCTGTGGTCAACCTGCTGGCACCAGAACCTCATGTGGGTGAAGTTGGTTCTTCATTCTCAAAGAAAGAGGCCACGGCTCAAAAAGGTTCTGAAGAAAGCTCTTCTAGAAGGAGCACTGGTGACAGCAATACAGAAACTACTTCATATAAAGAACAAATACTCTCAAGCGCACAGGGAGACCaaacttcaaaacaaaaagatcatAAAAAGGATTTGGTGGCTCCAATCCAGACCCCACTGACAAGTTCTTCACTCAATGGAAATGACAATAAATTACGTAATAAGGATACAGAAAATAAAGCCTGTAACTatgcaaaaggaaaatgggTTCTGGATGACAACCGGCCTTTGTATTCTGGGTTTGGTTGCAAGCAATGGCTTTCAGGGATGTGGGCTTGTCGGTTGACACAACGCACAGATTTTGCATATGAGAAGCTTCGGTGGCAGCCCAAAGATTGTAAGATGGACGAATTTGAGAAGTCCAAATTTTTGCAAAGgatgcaaaacaaaacactAGCTTTTGTTGGAGATTCATTGGGCCGGCAGCAGTTCCAATCTTTAATGTGCATGATCACTGGTGGTGAGGAGACACCTGATGTGGAAGATGTAGGAAAAGAATTCGGATTAATTTTGGTTGAGGGTGCTGCACGTCCGAGTGGGTGGGCTTACCGTTTCCCAAGCACCAATACTACCATCCTGTACTACTGGTCATCAATCCTTTGTGATGTTGAACCCATTGATGCTAATAACAGAGACACCGATTATGCCATGCACCTTGACCGGCCACCAGCATTTTTGCGTGAATTTATCCACAAGTTTGATGTCCTGGTTCTCAATACAGGGCACCACTGGAATCGAGGAAAAATTAAGGCAAACCGATGGGTAATGCATGTTGGAGGTGTGCCACTTACTGACAGGAAATTAGCAGTGATTTGGGCTGCCAAGAATCTCACAATTAATAGTGTTGTTAGTTGGGTGAATTCACAGCTTCCAAAATATCCAGGTTTGAAGGCATTCTTTCGTAGCATCTCCCCTAGGCATTTTATGGGTGGGGAGTGGAATACTGGTGGGAGTTGCAACAATACCACCCCAATGTCGGTAGGAAAGGAAATATTAGATGATGAATCTGCCGATCCAGTTGTAGGGAATGCTGTTAAGGGTACAGGGGTCAAGCTGTTGGACATAACGGGCCTTTCTCAGCTTAGGGATGAGGGTCATATGTCAAGGTTCAGCATCACAGCCAAGCCAGGAGTTCAGGATTGCCTACACTGGTGTTTGCCCGGTATTCCTGACACTTGGAATGAAGTCCTTTTTGCACAAATCTA 1493 0.4246 MKGGLYGLKGKEIGLISIVLMSATIIIWSWEKTPGLTLFLPSQTRVQQSSDILMRRPVVNLLAPEPHVGEVGSSFSKKEATAQKGSEESSSRRSTGDSNTETTSYKEQILSSAQGDQTSKQKDHKKDLVAPIQTPLTSSSLNGNDNKLRNKDTENKACNYAKGKWVLDDNRPLYSGFGCKQWLSGMWACRLTQRTDFAYEKLRWQPKDCKMDEFEKSKFLQRMQNKTLAFVGDSLGRQQFQSLMCMITGGEETPDVEDVGKEFGLILVEGAARPSGWAYRFPSTNTTILYYWSSILCDVEPIDANNRDTDYAMHLDRPPAFLREFIHKFDVLVLNTGHHWNRGKIKANRWVMHVGGVPLTDRKLAVIWAAKNLTINSVVSWVNSQLPKYPGLKAFFRSISPRHFMGGEWNTGGSCNNTTPMSVGKEILDDESADPVVGNAVKGTGVKLLDITGLSQLRDEGHMSRFSITAKPGVQDCLHWCLPGIPDTWNEVLFAQI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01132 497 Pfam PMR5 N terminal Domain 157 210 IPR025846 -
Bva05g01132 497 MobiDBLite consensus disorder prediction 87 117 - -
Bva05g01132 497 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 213 495 IPR026057 GO:0016740
Bva05g01132 497 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 4 497 - -
Bva05g01132 497 MobiDBLite consensus disorder prediction 67 150 - -
Bva05g01132 497 MobiDBLite consensus disorder prediction 132 146 - -
Bva05g01132 497 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 14 4 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01132 Bva-Chr5 5826086 5831185 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01132 - - gmx:100788136 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01132 05 5826086 5831185 Bva06g00507 06 5660635 5664238 BWGD
Bva05g01132 05 5826086 5831185 Bva05g01132 05 5826086 5831185 ECH