Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01111 ATGTCGGTTTCGCGTTGTCGGGAAAAGCTTCCAACCAAAACCCCTCCCAAAACCATAAAATCTTTCGTCAACCATATCGAACCCGTTACTCCAACCCAGACCAACGAAGCTATGTCTGACCCTTCTCCCATTTCCCCCAAATCGCCCCCAAGTTCAGTGCCGGAGAATCCTGGGTTCGGTTCCCGTTCTGTTGTCGACGGAATGGTGCGGCGGCGGAGTCTCCGCCTCGCCTCGAAATTGGATTTTTCCGAGTGCCCCATGAAAAGTTCGACCTCCCATAGTCGCCGCAAAAGGAAGGGCGATTGTGGTGGGAATGGGGCTTGCTTGGCCGAGGATGGCAAGGTAGAGAGGAAAATTGCTGGGGAAGTGGCTTCCCCCTGTGTGAATCCGTTGGAGAATGGAGGTATGAACTTGGATTCCAGTGGGAGCGCGATTAGGGTTTTTGAAGCTGAGAAAAAGGTTGACGGCAACAAGGAATTGGGTGAAAGCGGGTCAGGTCCGGCTGGAGACGGGTCAAATTATGATTCATTAATTGATGGGTCCACGTCTAgtgaagagaaaggaaagagtgagttgaatatgaataatttattgagtTCGGAATGTAGAACAGATGAAGGAAGCCAAGATTTTCTGAATTTGCGATCAGGGAAGAAGGTAGTTAAGAGAGGAATGGAGTTGGGTGGTCCTGGTTTTGATGAAAACAGTGATTTGGTAAATGGTGTATCCACTGACGAGAATGGTTGTGCTAAGCACAGTAGGAAAACGAGAAAAGAAGACAGAGAAAATGAGGAATCAATGAAGTGTGATTCAATATCAACTGGTATTGATGCGGTGAAACTGAGTCTCGAATTTCAAACACAGAATTTTATTGATCTTGCAGGTCAAATTGACGATTCTAAGCTAGTTGATGAAAGAAGAGCGGAAAGAGGTGATAGAAAGGGCAAAAGAAAGGTAGGTGACACCAGTGAACAGGATGTTGCTACTGGAAATATGGACAGAGCGGCAAGTCTCGATCTTGAGATTAGTCTAGGTCGAAAGAAACTCagcagagaagaaaaagggaaggGACCAATGACTGAGGATGAGTTATCACCGAATATTATTCGTGAGGCTGAATTTGGCTTAGAATCCAAAAAGCAGAGTTCAGGAGATAACAGTACTTCAGATGTCAACCATTTAGCAATGAGTAATGTGGCCTTACAAAATCGAGAACAATTGAGGAGCATTGATACAAGAGGAAATCGATACATGGAGCGTTTCCGAGATATAGCCAGGGAAAATGCTTCTCGATTTGCTCACTTTGCAGCAGATGAGGAAGATGATCATTCATCTCCTGAGGCTGAAGTGGAACCTGAAACTGAAGATTGGCCTGGTCCTTTCTCTACAGCTATGAAAATTATAGAAGACCGAACCAAGAAAACTATGCTAACAGGTTCTGTTTCTTCAGAAAGAAAGGATGTAACAATTACGTGGGTTCCAAAAAGGGATAAAGGgcaaaaaattgcaaaagttTCAGTCCCTTCGCTGCAAGAACTGAGCCTTAATATTCTTGCCAAGAATGCAGATGCAATTGTTTCACTTGAAAGTGTCCCAGATGCTCTGAAGCACAAGCTCTGCCAGTTGCTATGTGATTCTCGAAGAATGAATAGTCACATTTTCAAACTTATTGTTGGTGGATCTCCCACTGAGATCCGGATACGGGATTGTTCATGGCTAACAGAGGAAGAGTTCACAAAATCTTTTCAAATATGCGACACAACCAATTTAGTGGTCCTGCAACTTGACCAGTGTGGGCGCTGTTTGTCAGATTATGTAGTACTTGGTACTTTAGCAGAGTCATCAAAGAGATTATCTAGATTAACTAGTCTGTCCATCAGTGGTGCTTGCCGTCTTTCAGATGGGGGATTGCATGCACTAGTTTCTTCTGCTTCAGCACTTAGATCGATAAATCTCAGCCAGTGCTCCCTTTTGACATCTGCTTGTCTTAATATTTTGGCTGATTCACTTGGATCACTTCTTAAAGAGTTGTATCTTGATGATTGTCAAAGTATTGATGCTGCAATGATTGTCCCAGCATTGAAGAAGCTTGAAGGTTTAGAAGTATTGTCAGTGGCAGGTATCCACACTGTTTCAGACAAATTTATCAAGAGTTATATAACTTCTTGTGGTCACAATATGAAGGAGCTTGTTTTGAGGGATTGTGTAAAATTGACCGATTCATCAATGAAAGTCATTGCTGAAAGCTGTCCTGGATTATGGGCGCTTGATCTCGCTAACTTGTGCAGATTAACCGATTTTTCCGTTAAATATCTTACGAATGGGTGTCAAGCACTTCAGACTCTGAAACTCTGCCGCAATCAATtcagTGATGAAGCCATTGCTGCTTTTTTAGAGACCGCTGGGGAGTCCTTAAAAGAACTTACACTTAATAACGTGAAGAAGGTTGATCACCATACAGCCTTGTCACTTGCAACACATGCAAAGAATTTGCATACCCTGGATCTATCTTGGTGCAGAAATTTGACAGACAATGCAGTGGGTTTAATTGTGGACAGTTGCTCATCACTGAGGTTGCTCAAACTCTTTGGGTGTTCGCAGATTACAGATGTTTTCGTGAACGGCCACTCAAATCCAGGGATCCAGATCGTTGGTTTGAAGCTGTCTCCTGTATTGAAAAATGTCAGAGTGCCCGATCTTGAAGAAGGGGCTTTGCATTATTCTGCTGTCACCTCCACCTCATA 2744 0.4227 MSVSRCREKLPTKTPPKTIKSFVNHIEPVTPTQTNEAMSDPSPISPKSPPSSVPENPGFGSRSVVDGMVRRRSLRLASKLDFSECPMKSSTSHSRRKRKGDCGGNGACLAEDGKVERKIAGEVASPCVNPLENGGMNLDSSGSAIRVFEAEKKVDGNKELGESGSGPAGDGSNYDSLIDGSTSSEEKGKSELNMNNLLSSECRTDEGSQDFLNLRSGKKVVKRGMELGGPGFDENSDLVNGVSTDENGCAKHSRKTRKEDRENEESMKCDSISTGIDAVKLSLEFQTQNFIDLAGQIDDSKLVDERRAERGDRKGKRKVGDTSEQDVATGNMDRAASLDLEISLGRKKLSREEKGKGPMTEDELSPNIIREAEFGLESKKQSSGDNSTSDVNHLAMSNVALQNREQLRSIDTRGNRYMERFRDIARENASRFAHFAADEEDDHSSPEAEVEPETEDWPGPFSTAMKIIEDRTKKTMLTGSVSSERKDVTITWVPKRDKGQKIAKVSVPSLQELSLNILAKNADAIVSLESVPDALKHKLCQLLCDSRRMNSHIFKLIVGGSPTEIRIRDCSWLTEEEFTKSFQICDTTNLVVLQLDQCGRCLSDYVVLGTLAESSKRLSRLTSLSISGACRLSDGGLHALVSSASALRSINLSQCSLLTSACLNILADSLGSLLKELYLDDCQSIDAAMIVPALKKLEGLEVLSVAGIHTVSDKFIKSYITSCGHNMKELVLRDCVKLTDSSMKVIAESCPGLWALDLANLCRLTDFSVKYLTNGCQALQTLKLCRNQFSDEAIAAFLETAGESLKELTLNNVKKVDHHTALSLATHAKNLHTLDLSWCRNLTDNAVGLIVDSCSSLRLLKLFGCSQITDVFVNGHSNPGIQIVGLKLSPVLKNVRVPDLEEGALHYSAVTSTS 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01111 914 MobiDBLite consensus disorder prediction 304 334 - -
Bva05g01111 914 MobiDBLite consensus disorder prediction 248 266 - -
Bva05g01111 914 MobiDBLite consensus disorder prediction 1 106 - -
Bva05g01111 914 Gene3D Ribonuclease Inhibitor 514 718 IPR032675 -
Bva05g01111 914 MobiDBLite consensus disorder prediction 156 192 - -
Bva05g01111 914 PANTHER F-BOX/LRR PROTEIN 68 908 - -
Bva05g01111 914 MobiDBLite consensus disorder prediction 436 461 - -
Bva05g01111 914 MobiDBLite consensus disorder prediction 25 42 - -
Bva05g01111 914 MobiDBLite consensus disorder prediction 304 323 - -
Bva05g01111 914 PANTHER UNCHARACTERIZED 68 908 - -
Bva05g01111 914 MobiDBLite consensus disorder prediction 232 266 - -
Bva05g01111 914 SUPERFAMILY RNI-like 564 871 - -
Bva05g01111 914 MobiDBLite consensus disorder prediction 175 192 - -
Bva05g01111 914 SMART LRR_CC_2 618 643 IPR006553 -
Bva05g01111 914 SMART LRR_CC_2 724 749 IPR006553 -
Bva05g01111 914 SMART LRR_CC_2 644 669 IPR006553 -
Bva05g01111 914 SMART LRR_CC_2 750 775 IPR006553 -
Bva05g01111 914 SMART LRR_CC_2 828 853 IPR006553 -
Bva05g01111 914 SMART LRR_CC_2 776 800 IPR006553 -
Bva05g01111 914 SMART LRR_CC_2 854 887 IPR006553 -
Bva05g01111 914 MobiDBLite consensus disorder prediction 349 368 - -
Bva05g01111 914 Gene3D Ribonuclease Inhibitor 719 800 IPR032675 -
Bva05g01111 914 Gene3D Ribonuclease Inhibitor 801 894 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01111 Bva-Chr5 5726135 5731894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01111 K15082 - qsu:112039828 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01111 05 5726135 5731894 Bva06g00529 06 5758500 5763582 BWGD
Bva05g01111 05 5726135 5731894 Bva05g01111 05 5726135 5731894 ECH