Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01090 ATGAGTTTCATATTcggaaagagaaaaactccTGCAGAGCTTCTGCGggaaaataagagaatgtTGGACAAATCAATCAGAGAAATTGAACGGGAGAGGCAAGGTTTACaagcacaagaaaagaaactgattatggaaataaagaaaagtgcCAAGCAGGGCCAAATGGGTGCAGTGAGAGTGATGGCAAAAGATCTTGTTCGAACAAGGCATCAGATTGAGAAGTTTTATAAGCTTAAATCACAGCTCCAGGGTGTATCGCTCCGAATTCAGACTTTAAAATCAACGCAAGCTATGGGTGAGGCGATGAAAGGTGTGACAAAAGCAATGGGGCAGATGAATAGGCGGATGAACCTGCCCTCTTTGCAGAAGATCATGCAAGAATTTGAGAGGGAGAACGAAAGGATGGAATTGACAACTGAAGTGATGGGAGACGCAATAGATGATGCTTTGGAAggggatgaagaagaagaagaaacagaagaCCTAGTTAACCAGGTTCTCGATGAGATTGGAATCAACGTAAACCAAGAGCTTGTGAATGCCCCATCAGCCGCTGTTGCAGCCCCAGCAGCGAAGACTAAGGTGCCTCAAGCCGAAGCTACAGGGAATGATGACAGCGGGATCGATAGTGATTTGCAGGCAAGGCTAgacaatttaagaaaaatgta 671 0.3785 MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLIMEIKKSAKQGQMGAVRVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRMNLPSLQKIMQEFERENERMELTTEVMGDAIDDALEGDEEEEETEDLVNQVLDEIGINVNQELVNAPSAAVAAPAAKTKVPQAEATGNDDSGIDSDLQARLDNLRKM 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01090 223 Gene3D - 6 181 - -
Bva05g01090 223 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 223 IPR005024 GO:0007034
Bva05g01090 223 MobiDBLite consensus disorder prediction 186 223 - -
Bva05g01090 223 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 223 - -
Bva05g01090 223 Coils Coil 12 46 - -
Bva05g01090 223 Coils Coil 119 139 - -
Bva05g01090 223 Pfam Snf7 17 186 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01090 Bva-Chr5 5598483 5601062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01090 K12191 - gmx:100526885 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01090 05 5598483 5601062 Bva06g00553 06 5877533 5880274 BWGD
Bva05g01090 05 5598483 5601062 Bva05g01090 05 5598483 5601062 ECH