Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01049 ATGAGCAACGACAAGGATAACTTCAGCATGGCGGATCTCAGCTCCGCTCTGAACGAAGAGAATCGTGCAGACCTAGTCAATGCTCTCAAGAATAAGATACAGAGTCTGGCTGGGCAGCACTCTGATATTCTGGAGAGTCTATCGCCTGACGTGAGGAAGCGTGTTGATGTTCTCAGAGAGATCCAGGGTCAACATGATGAACTAGAGGCAAGGTTTTTCGAGGAGAGAGCAGCTCTTGAGGCTAAATACCAAAAGTTGTATCAACCATTATACACGAAGCGCTATGAAATTGTAAATGGTGTTGTTGAAGTTGAAGGGGCAAATGAAACAACTGCTGATACAGAAGAGGACAAAGAGAAAGGAGTTCCTGCTTTCTGGCTCAatgcaatgaaaaataatgaagtgTTAGCTGAGGAGATTTCCGAGCGTGATGAAGGTGCTCTTAAGTTTCTCAAAGACATTAAATGGAGCAGGATAGAAAACCCCAAAGGATTCAAGCTTGAGTTCTTCTTTGATACCAATCcttattttaagaattctgTCTTGACCAAAACATATCACATGATTGATGAAGATGAACCTATACTGGAGAAAGCAATtggGACGGAAATTGAATGGCATCCAGGGAAGTGTTTGACACAGAAGCTCCTTAAAAAGAAGCCTAAGAAGGGTTCAAAGAATGCTAAACCAATTACTAAGACTGAAAATTGTGAaagtttcttcaattttttcaatcCACCACAAGTCCCTGAAGATGACGAAGATATTGATGAAGATACGGCTGAGGAACTTCAAAACCAAATGGAACAAGATTATGACATAGGGTCAACCATAAGAGACAAGATTATCCCCCATGCGGTGTCATGGTTTACTGGGGAGGCCATTCAAGGAGAAGAGTTTGGAGACCTAGAGGATGATGATGACGACGACGAGGATATTGAggaggatgaagatgaagaggaggaggatgaggatgaagaagacgatgatgatgaggatgaGGATGAGGAAGAAACCAAGACCAAAAAGAAGTCTTCATCACGTAAGAAGGGTGGAAGAGCGCAGATTGGCGATGGTCAGCAGGGTGAGCGACCTCCAGAGTGCAAGCAGCAGTA 1115 0.391 MSNDKDNFSMADLSSALNEENRADLVNALKNKIQSLAGQHSDILESLSPDVRKRVDVLREIQGQHDELEARFFEERAALEAKYQKLYQPLYTKRYEIVNGVVEVEGANETTADTEEDKEKGVPAFWLNAMKNNEVLAEEISERDEGALKFLKDIKWSRIENPKGFKLEFFFDTNPYFKNSVLTKTYHMIDEDEPILEKAIGTEIEWHPGKCLTQKLLKKKPKKGSKNAKPITKTENCESFFNFFNPPQVPEDDEDIDEDTAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQGEEFGDLEDDDDDDEDIEEDEDEEEEDEDEEDDDDEDEDEEETKTKKKSSSRKKGGRAQIGDGQQGERPPECKQQ 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01049 371 SUPERFAMILY NAP-like 29 311 IPR037231 -
Bva05g01049 371 Pfam Nucleosome assembly protein (NAP) 53 293 IPR002164 GO:0005634|GO:0006334
Bva05g01049 371 Gene3D - 45 104 - -
Bva05g01049 371 MobiDBLite consensus disorder prediction 298 336 - -
Bva05g01049 371 MobiDBLite consensus disorder prediction 293 371 - -
Bva05g01049 371 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 1 371 IPR002164 GO:0005634|GO:0006334
Bva05g01049 371 Gene3D Nucleosome assembly protein 117 293 - -
Bva05g01049 371 PANTHER NUCLEOSOME ASSEMBLY PROTEIN 1,2 1 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01049 Bva-Chr5 5402193 5405294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01049 K11279 - gmx:100785314 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01049 05 5402193 5405294 Bva06g00591 06 6089210 6092473 BWGD
Bva05g01049 05 5402193 5405294 Bva05g01049 05 5402193 5405294 ECH