Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01044 atggCTGAAAATCTCCCCTTTCCTACATATTTCATTATGATACTCATCAATGCTATCACCCGTTTGATATTCATCGCCGGAAAAAGCCAGCCATGGTCAACTTTGGTACCCTCAAAGCTGGCCGCCCCCGTCGATGACATCTCCGACAAACTCCACACCGACCCAGAAGCCATTAAATTGGCTTCAAGCGACTACGGCAACATGGTGAACGAATCACCGGCCGCTGTGCTTTATCCATCATCCATTTACGACATCATAAGCCTAATAAAATCCTCGTACAACAGCTATGTCCCCTTCGGCATAGCCACAAGAGGCAATGGCCATTCCACTCGAGGGCAGGCCATGGTGCGTAATGGGATAGTGGTGGACATGTCGAGCTTCAGAAAACACAGAGCCGGGAAAGGGATCACTTTCTCTGTCTCTAAAGACCCTTCAATTGGCTACTATGCTGATGTTGGAGGCGAGCAACTTTGGATTGATGTGCTCTTAAGCTCTGTGGAACGTGGACTTGCACCTGTCTCCTTCACAGACTACCTGTACCTCACCGTCGGCGGCACACTCTCCAACGCCGGCATCAGCGGCCAGAGCTTCCGGTATGGGCCTCAGATAAGCAATGTTCATGAGATGGATGTCGTCACCGGAAAAGGCGATTTTGTAACTTGCTCTCCAGAGAAGAATCAAGAATTATTTCACGCTGTTCTTGGAGGTTTAGGACAATTTGGAATCATAGCCAGAGCAAGAATTTCCCTGGAGCCAGCACCAAAGATGGTTAAGTGGATCAGGCTTCTTTACAATGACTTCTCTGCTTTTACCAAGGACCAAGAACGATTAATCTCCATCAATggaaggaaacaaaagaatgcaTTGGATTATTTGGAAGGAATGCTTCTCATGCACCAAGGCTCCATTAATAATTGGAGGTCTTCTTTCTTCCCATTGTCTGACCATCCAAAGATCATTTCCCTTATGACCAAACATAGCATTATCTACTGCCTTGAAGTGGCCAAATATTATGATGACAATTCCGAAAATGACGTGGACAAGGAGCTCCAAGATTTACTTCAAGGACTGAGCTGTATCCCTGGATTgtattatgagaaaaaagtgTCCTATGTGGATTTCTTAAATAGAGTCAGAAGTGGGGAGCTGAAACTTCAATCACAAGGATTATGGGATGTTCCACATCCATGGTTGAATTTGTTTATCCCAAAATCTCGTATCCTAGATTTTGATTCTGGTGTGTTCAAAGATATCATGCTTAAGGGGAACATAACGACAGGACCTGTCTTGGTTTACCCCTTGAACAGAAGCAAGTGGGATGATAGGATGTCTGCATCCATACCGGATGAGGAAGTGTTCTACACAGTGGGATTCTTGCACTCAAGTGGGTTTGACAATTGGGAAGCCTTTGTagctcaaaataaaaagattttgcaGTTTTGTGATAATACTGGGATCAAAGTGAAGCAGTATCTGCCCCATTACCGCACACAGGAAGATTGGAAAAACCATTTCGGATCAAAATGGAGGAGTTTTCAAGAAAGCAAACAGaaatttgatccaagaatgaTTCTATCACCTGGACAGAGAATTTTCATTGGCAATTA 1607 0.4263 MAENLPFPTYFIMILINAITRLIFIAGKSQPWSTLVPSKLAAPVDDISDKLHTDPEAIKLASSDYGNMVNESPAAVLYPSSIYDIISLIKSSYNSYVPFGIATRGNGHSTRGQAMVRNGIVVDMSSFRKHRAGKGITFSVSKDPSIGYYADVGGEQLWIDVLLSSVERGLAPVSFTDYLYLTVGGTLSNAGISGQSFRYGPQISNVHEMDVVTGKGDFVTCSPEKNQELFHAVLGGLGQFGIIARARISLEPAPKMVKWIRLLYNDFSAFTKDQERLISINGRKQKNALDYLEGMLLMHQGSINNWRSSFFPLSDHPKIISLMTKHSIIYCLEVAKYYDDNSENDVDKELQDLLQGLSCIPGLYYEKKVSYVDFLNRVRSGELKLQSQGLWDVPHPWLNLFIPKSRILDFDSGVFKDIMLKGNITTGPVLVYPLNRSKWDDRMSASIPDEEVFYTVGFLHSSGFDNWEAFVAQNKKILQFCDNTGIKVKQYLPHYRTQEDWKNHFGSKWRSFQESKQKFDPRMILSPGQRIFIGN 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01044 535 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 254 532 IPR015345 GO:0009690|GO:0019139|GO:0050660
Bva05g01044 535 SUPERFAMILY FAD-binding/transporter-associated domain-like 49 252 IPR036318 GO:0050660
Bva05g01044 535 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 14 532 - -
Bva05g01044 535 Gene3D - 54 532 IPR016167 -
Bva05g01044 535 PANTHER GULONOLACTONE OXIDASE 14 532 - -
Bva05g01044 535 SUPERFAMILY FAD-linked oxidases, C-terminal domain 254 532 IPR016164 GO:0003824|GO:0050660
Bva05g01044 535 Gene3D - 256 491 IPR016170 -
Bva05g01044 535 ProSiteProfiles PCMH-type FAD-binding domain profile. 69 253 IPR016166 GO:0071949
Bva05g01044 535 Pfam FAD binding domain 73 222 IPR006094 GO:0050660
Bva05g01044 535 Gene3D - 124 255 IPR016169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01044 Bva-Chr5 5375797 5378625 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01044 K00279 - gmx:100782645 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01044 05 5375797 5378625 Bva06g00597 06 6123475 6126800 BWGD
Bva05g01044 05 5375797 5378625 Bva05g01044 05 5375797 5378625 ECH