Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01040 ATGGCTGAGCCAGCGACAGCATCAACCGTATCTATGATCGCTTTCGTGGCGAGTTGGGTTACgccttcttctcttttcctctttctcaaCCTCGTCGTCGGCTCCATACTACTCTCTTATCGTTTCACCCCTAAGAAGCCAACGCAGAAATCAGAACTCGGACCCCATGACTCATCTCAACTCGTCCGGTCATCCTCACTTCTGGAACGAGTTAGGTCCTTCAATTTCGGGTTCCAGAAATACGAACCAACAAATGTGGAGACAGAGTATATTCAACCCGTCCGTGACAGGCCGCAACTCGTCCGAACACCGTCCCTGTTGGAGCGAGTCACTTTGTTCAATTTTGGTTTCCACAAATACGACTCGGTAGCTGCAGAAACAGAGCATATTCAACCAGACCAGCCCGAATGCCAACATCCGAATCCAAACCCAGATAACCCGCCCGAGGGACAAGAACGGCTAGCTCGAACTCCTTCGCTCTTGGAGCGGCTCAAGTCCATCAACTTCTCTGCTCTCTATAGATCGGACTCCGTGCATGCAGATGAAGAATCTGATATTCAGGCTCAGGGCTCCGACCAGGATCATACTAGCGGGAATTTGGTCAAGAGTAGCAAGTCGGCAACCCATAAACAGTCGCCGGCGAAGTCGTCGGTGAAGAAATCTGCCAGTGAGAAGTCAAATTTTAGGAACTTCGACGGGAATGAAGCCAAGATGGAGCAGCGGAGGCCAGAGACTGTGAGGAACAGCGGTAGGGAGAGTGAAACGACCTCGTTTGGAGAAGATGATGGGGTTGACGCCAAGGCTGATGATTTTATTAACAGGTTTAAGCAGCAACTCAGATTGCAGAGGCTCGATTCTCTTCTCCGTTACAGAGAAACTCCGAGACCAAACTG 893 0.4916 MAEPATASTVSMIAFVASWVTPSSLFLFLNLVVGSILLSYRFTPKKPTQKSELGPHDSSQLVRSSSLLERVRSFNFGFQKYEPTNVETEYIQPVRDRPQLVRTPSLLERVTLFNFGFHKYDSVAAETEHIQPDQPECQHPNPNPDNPPEGQERLARTPSLLERLKSINFSALYRSDSVHADEESDIQAQGSDQDHTSGNLVKSSKSATHKQSPAKSSVKKSASEKSNFRNFDGNEAKMEQRRPETVRNSGRESETTSFGEDDGVDAKADDFINRFKQQLRLQRLDSLLRYRETPRPN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01040 297 MobiDBLite consensus disorder prediction 190 229 - -
Bva05g01040 297 PANTHER DUF4408 DOMAIN PROTEIN 96 293 - -
Bva05g01040 297 PANTHER COTTON FIBER (DUF761) 96 293 - -
Bva05g01040 297 Pfam Cotton fibre expressed protein 261 292 IPR008480 -
Bva05g01040 297 PANTHER DUF4408 DOMAIN PROTEIN 10 80 - -
Bva05g01040 297 MobiDBLite consensus disorder prediction 230 266 - -
Bva05g01040 297 MobiDBLite consensus disorder prediction 128 153 - -
Bva05g01040 297 PANTHER COTTON FIBER (DUF761) 10 80 - -
Bva05g01040 297 MobiDBLite consensus disorder prediction 180 266 - -
Bva05g01040 297 Pfam Domain of unknown function (DUF4408) 11 42 IPR025520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01040 Bva-Chr5 5349667 5350849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01040 - - dzi:111285540 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01040 05 5349667 5350849 Bva06g00600 06 6145165 6146248 BWGD
Bva05g01040 05 5349667 5350849 Bva05g01040 05 5349667 5350849 ECH