Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01012 ATGATTACTGGTAAGGATATCTACGATGTTCTTGCAGCAATTGTGCCCTTATACGTTGCTATGATACTAGCATATGGGTCGGTTCGTTGGTGGAAGATCTTCACCCCTGATCAGTGCTCTGGCATAAACCGTTTTGTTGCTGTTTTCGCAGTTCCTCTGctttctttccatttcatttcttcaaatgaCCCTTATGCCATGAACTACCACTTCATAGCAGCTGATTCTTTGCAAAAAGTTGTCATCTTGGGCGCTCTTTTTCTGTGGAATGTCTTCACAAAGCATGGTAGCCTAGACTGGATGATCACCCTTTTCTCACTTTCCACTCTGCCAAACACCCTCGTCATGGGGATACCTCTGTTGAAGGCCATGTACGGAGACTTCTCGGGGAATCTCATGGTTCAAATCGTGGTCTTGCAAAGTGTTATCTGGTACACTCTAATGCTGTTCATGTTTGAATACAGAGGTGCTAAGCTTCTTATATCAGAGCAGTTCCCCGAGACTGCAGGGTCCATCACCTCCTTCAGGGTTGATTCTGATGTTGTCTCACTCAATGGCAGAGAGCCTCTGCAAGCTGATGCAGAGATTGGAGAAGATGGGAAACTGCATGTAGTGGTTAGAAGATCGGCTGCTTCTTCCATGATTTCTTCCTTTAACAAGTCACATTTAACTTCTATGACACCACGAGCATCGAATCTCACTGGGGTTGAGATCTATTCGGTTCAGTCCTCCAGAGAACCAACCCCGAGAGCTTCGAGTTTCAATCAAACAGACTTCTATGCCATGTTCGCTAGCAAAGCACCAAGTCCAAAACATGGCTACACAAACAGTTTCCAAAGCACTGGTTATAATGGCGATGTTTACTCGTTGCAATCCTCTAAAGGTCCAACGCCAAGGACTTCAAATTTTGAGGAGGAAATGTTGAAGATGCACAAGAAAAGGGGAGGAAGGAGCATGAGTGGTGAGTTGTTCAATGGTGGTTTGGTGTCTTCTTATCCGCCACCAAATCCCATGTTTTCTGGGTCAACCAGTGGTGGCCCTAAGAAGAAAGATAGCACTGCTGCTGCTGCCAACAAGGAGCTTCACATGTTTGTTTGGAGCTCAAGTGCTTCCCCTGTTTCTGAAGGCAACCTCAGACACGCAGTAAATAGAGCTGCTTCTACTGATTTTGGAGCCATTGATCCTTCCAAGGTTGTTCCACCAGAGACTGTTGCCTCAAAAGCTGTTAGTGAATTAATCGAGAACATGAGTCCTGGTCGTAAAGAAAAAGATCAGCTAGAGATAGAGGAAGGAACCAAATTTCCCACGAATGGGTCGCCATACACTTGCCAGAAGAAGATGGATATGGAAGAAGGAGAGGCAAATAAGAAGCATCAGATGCCACCTACAAGTGTGATGACAAGACTTATTCTTATCATGGTTTGGAGAAAGCTCATCAGGAATCCTAATACCTACTCAAGTCTTCTGGGCATCACATGGTCTCTCATATCATATAGGTGGAACATCCAAATGCCCTCAATAGTAAAAGGTTCCATTTCAATATTGTCCGATGCCGGTCTAGGAATGGCCATGTTCAGTCTAGGTTTATTCATGGCTTTACAGCCCAAGATCATAGCTTCTGGGAAATCTGTAGCAGCTTTTTCTATGGCTGTTCGCTTCTTGACAGGTCCAGCTGTGATAGCCGCTTGTTCAATAGCGATTGGCATTCGTGGAGTTCTTTTACATGTTGCGATTGTTCagGCTGCTCTTCCTCAGGGTATTGTTCCCTTTGTTTTTGCCAAAGAATATAATCTCCACGCCGATATACTTAGCACTGCGGTTATATTTGGAATGCTGATTGCATTGCCCATCACAATACTTTACTACGTGCTTCTTGGCCTTTG 1883 0.4413 MITGKDIYDVLAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPYAMNYHFIAADSLQKVVILGALFLWNVFTKHGSLDWMITLFSLSTLPNTLVMGIPLLKAMYGDFSGNLMVQIVVLQSVIWYTLMLFMFEYRGAKLLISEQFPETAGSITSFRVDSDVVSLNGREPLQADAEIGEDGKLHVVVRRSAASSMISSFNKSHLTSMTPRASNLTGVEIYSVQSSREPTPRASSFNQTDFYAMFASKAPSPKHGYTNSFQSTGYNGDVYSLQSSKGPTPRTSNFEEEMLKMHKKRGGRSMSGELFNGGLVSSYPPPNPMFSGSTSGGPKKKDSTAAAANKELHMFVWSSSASPVSEGNLRHAVNRAASTDFGAIDPSKVVPPETVASKAVSELIENMSPGRKEKDQLEIEEGTKFPTNGSPYTCQKKMDMEEGEANKKHQMPPTSVMTRLILIMVWRKLIRNPNTYSSLLGITWSLISYRWNIQMPSIVKGSISILSDAGLGMAMFSLGLFMALQPKIIASGKSVAAFSMAVRFLTGPAVIAACSIAIGIRGVLLHVAIVQAALPQGIVPFVFAKEYNLHADILSTAVIFGMLIALPITILYYVLLGL 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01012 627 Pfam Membrane transport protein 10 622 IPR004776 GO:0016021|GO:0055085
Bva05g01012 627 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 627 - -
Bva05g01012 627 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 627 IPR033526 GO:0010315|GO:0010329
Bva05g01012 627 TIGRFAM 2a69: auxin efflux carrier 1 627 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01012 Bva-Chr5 5197686 5200623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01012 101 627 Organic Solute Cotransporters AT5G57090 73.960 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01012 K13947 - gmx:100305383 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01012 05 5197686 5200623 Bva06g00632 06 6293369 6296153 BWGD
Bva05g01012 05 5197686 5200623 Bva05g01012 05 5197686 5200623 ECH