Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01003 ATGTGGTTTTCCTTTTGGAGATCCAGGGATCGTTTCTCCTTAGATGAACTCAGATATCTAACCGATCATTTGGCAAAAGTTCAAATTGTTAATAAGGTTAataagGATTTTGTTATCGAGGCACTGAGATCCATTGCGGAGTTGATAACATACGGTGACCAACATGACTTGGGCTTTTTTGAATTCTTCATGGAAAAGCAAGTCATGGGAGAGTTTGTACGTATTCTAAAGCTTAGCAGGACTTCCAGTGTTTCACTTCAGTTGCTACAAACAGTGAGCATTATGATCCAGAACCTACAAAGTGAACATTCTATATATTATATGTTTAGTAACGAACATACGAACTACCTCATAAcatattcatttgattttcgTAATGAAGAGATATTGTCTTACTACATATCCTTTTTAAGAGCAATAAGCGGAAAATTGAACAGGAATACAATTTCTCTTCTTGTGAAGACTCGTGGTGATGAAGTAGTTTCATTTCCACTGTATGTGGAGGCTATACGCTTTGCCTTTCATGAGGAGAACATGGTTCGTACTGCAGTACGGACTGTGACCCTTAATATTTATCACGTTGGAGATGACTCTGTAAATAGATACATAACCAGTGCACCTCATGCGGATTActtctcaaatttaatttccttttttaggAAGCAGTGCATTAATCTAAATAGACTGGTGTCTGAAACACTGAAGAATCCAGGTCCAGATTCAACCTCCAGAATATTTTCTGCTGTAGATGAAATTGAGGATAACCTGTACTACTTTAGCGATGTTGTCTCTGCTGGGATTCCTGATGTTGGGAGGATAATAACAGACAGCATGTTGATGTTTTTGATATTTCCACTGCTTCTTCCTTCCCTGAGGATAGTGGCTGTTAATGATATGCAAAGTGCTGTTGTCACTTCTCTATACTTACTTTGTTGCCTCTTGAGGATTGTCAAGATCAAGGATTTGGCAAATACCATAGCTGCTGCTCTTTTTTGTCCCTTAGTGGCTGTTACAAAAAGTTCTGGGGCTGAAATCAATGGCCATATATCTGATCATAGGTTCACATCAGAGAGCCAAGGATCAGATAATGATAGTCTTAGTAAGTGTGATGCAGGGGGATCAAAAATCGATTTCCCATGCACATCTGATTCAGGTTTTCATCCAGAAAACGTTATCATGCAAAATGATTGTACCAATTCAAATTTGGCTTTAAGGGAGGTTTTACTGGCATACCTAACAACAGGGGATGATATACAAGTTTTAGGTTCTTTGAGTGTGCTTGCTACTCTGCTGCAAACTAAAGAACTTGATGAATCAATGCTAGATGCGCTTGGAATTCTCCCACAACGCAAACAACACAAGAAACTCTTATTGCAAGCTTTAGTTGGTGAGGCTTCAGGGGAGGAGcaacttttttcttcaagTGGCTTCATAAAGGATGGCTTTGGTAATGAGTTTGATGTCTATATGGAAAAGATCAAGGAGCTGTATGGGGTATTTCCCCCCTCCTCTGAAGAGGGAACAAGCCCTCGTGTACCCAGATTTCAGGTGCTTGATGCATTAGTTAGTCTCTTTTGCCGCTCTAATATATCCGCAGAGACAATGTGGGACGGTGGTTGGCTTCTGCACCAGTTGCTTCCATACAGTGAGGCTGAATTTAACAGCCATCATCTTGAATTGCTGAAAGGTTCATACAAGAGTTGTGCTTCTGCTTTTGTGGATGAGTTTAGAGGTATTTGGCCTGATGTACTTATTACAGTTCTCTGTGATGAGTGGAGGAAGTGCAAACGAGCAATGGAGTCGTCAGCTCCTCAGAAAGAACCAAAGTGCATGCTTTTGCCACCACAGAAGTTCTCTTCAGAAGATGATATTCCATATGGGTCATCGTTTGCTGCTGGAGAAAGAATGCATGAGTTGGTGAAGgTATTTGTACTTCTGCACCAACTTCAAATATTCACTCTTGGTCAAAACTTGCCTGAGAAACCTCCAATTTACCCCCTTGGTGATCTTCCTAAGGACTCTCGTGCTCAAACTTCTGGCCTTGATGCAACAGGCCCAAAGCCAGGCACTGAAGTCGGCCTTGTTAATGCTGTGCCTTGTAGAATTTCTTTTGAGAGGGGCAAAGAAcgtcatattttctttctagcaGTCTCCATTGGAACATCTGGGTGGCTTGTGCTCGCTGAAGAATTGCCACTGAAGAAGAATGATGGAATCGTCCGGGTTACTGCACCTTTGGCGGGGTGCAATCCCAGGGTTGATGATAAACATTCAAGATGGTTACACTTGCGGATCCGTCCATCATCTCTACCCTTCTTGGATCCTGTCAAGTTCAATGCctatggaagaaaaaaatcaaaagctttGGTAGATGGAAGATGGACATTGGCGTTCAGGGATGAGGAGTCCTGCAAGTCTGCCTTAGTCATGACTcttgaagagattaaatttcTAAGCGATGAGGTCCATAGAAGATTAAAACCTTTGCTCAACCTTGACACTGCAATAGATTCATCAACCTCTTCCTTCCATCTTCCAGAGGTATCCTCTCCATATACAATACCTCCAGATTCATCGTA 2579 0.3986 MWFSFWRSRDRFSLDELRYLTDHLAKVQIVNKDFVIEALRSIAELITYGDQHDLGFFEFFMEKQVMGEFVRILKLSRTSSVSLQLLQTVSIMIQNLQSEHSIYYMFSNEHTNYLITYSFDFRNEEILSYYISFLRAISGKLNRNTISLLVKTRGDEVVSFPLYVEAIRFAFHEENMVRTAVRTVTLNIYHVGDDSVNRYITSAPHADYFSNLISFFRKQCINLNRLVSETLKNPGPDSTSRIFSAVDEIEDNLYYFSDVVSAGIPDVGRIITDSMLMFLIFPLLLPSLRIVAVNDMQSAVVTSLYLLCCLLRIVKIKDLANTIAAALFCPLVAVTKSSGAEINGHISDHRFTSESQGSDNDSLSKCDAGGSKIDFPCTSDSGFHPENVIMQNDCTNSNLALREVLLAYLTTGDDIQVLGSLSVLATLLQTKELDESMLDALGILPQRKQHKKLLLQALVGEASGEEQLFSSSGFIKDGFGNEFDVYMEKIKELYGVFPPSSEEGTSPRVPRFQVLDALVSLFCRSNISAETMWDGGWLLHQLLPYSEAEFNSHHLELLKGSYKSCASAFVDEFRGIWPDVLITVLCDEWRKCKRAMESSAPQKEPKCMLLPPQKFSSEDDIPYGSSFAAGERMHELVKVFVLLHQLQIFTLGQNLPEKPPIYPLGDLPKDSRAQTSGLDATGPKPGTEVGLVNAVPCRISFERGKERHIFFLAVSIGTSGWLVLAEELPLKKNDGIVRVTAPLAGCNPRVDDKHSRWLHLRIRPSSLPFLDPVKFNAYGRKKSKALVDGRWTLAFRDEESCKSALVMTLEEIKFLSDEVHRRLKPLLNLDTAIDSSTSSFHLPEVSSPYTIPPDSS 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01003 856 Pfam Uncharacterised conserved protein 39 189 IPR019155 -
Bva05g01003 856 PANTHER PROTEIN TRANSPARENT TESTA 9 1 838 - -
Bva05g01003 856 MobiDBLite consensus disorder prediction 662 685 - -
Bva05g01003 856 PANTHER UNCHARACTERIZED 1 838 IPR039272 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01003 Bva-Chr5 5131999 5140791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01003 K19513 - gmx:100786267 1295.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01003 05 5131999 5140791 Bva06g00644 06 6356376 6365239 BWGD
Bva05g01003 05 5131999 5140791 Bva05g01003 05 5131999 5140791 ECH