Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00983 ATGCAGGTAACTGAAGACAAGGAAAAGGAGGAGGAAACCAAGGTTGTTCTTACAACCCCGTTCTCAATAGGAGAATCAGATGACGTTTATAGAGCTCCAAATCTTCTCCAACGCATCTTAAGTCTACTTAAGAATGTACGGCCAGGATCCGATCTCACCCGCTTCCAGTTGCCACCTCTGTTTAACTTTCCAAAGTCACAACTTCAGTGCTACGGCGAGTCTGTGTATTCCACGTCTTCAGACTTGTTAAGCAAATGCAACAATGGGCAGAACCCTTTGGATAGGTTCACATCTGTAGTAGCATGGAGCATATCCACTACAAGGCCTGCTGTTTTTGGAGTTGCTCCTTATAATCCCATCCTTGGAGAAACTCATCATGTTTCAAAGGGCACTCTCAATGTATTACTTGAGCAGGTTTCGCACCACCCTCCAGTAGCTGCTCTCCATGCAACGGATAAGGAGCAAAATATAGAGATGATTTGGTGCCAGCATCCTAATCCAAAGTTCAATgGTACTTCGGTGGAAGCTCAAGTGCATGGTAAAAGGGAGTTGAAGCTGCTGAATCATGGAGAAAGCTATGAAATGAATTCCCCTAGTCTGTTTATTAGAGTTCTTCCAGTACCTGGGATTGAGTGGATTGGTAACGTTAATATAAGCTGCCAAGAAAGTGGCCTGGTAGCAGAGTTATGCTATAGAAGCTCTTTCTTGGGCATTGGTGGAAAGCAAAGATTGATCAAAGGCAAGATCTTTGACTCATCCTCATTGAAGGTTCTCTACGAAGTTGATGGTCAGTGGGATAGTACAGTAACtgttaaggataaaaatactGGGAAAGTTAGAGTTATATATGATGCAAAAGAAGTTATTTCAGGGCTTCAAACTCCTATTCTCAAGGATGCAGAGAGTGTGAGAGCAACTGAATCAGCTCTTGTTTGGGGTAAGTTGAGCCAAGCCATTATGAACAAAGACTGGGAAAAAGCAAGAGTAGCAAAGCAAATTATAGAGGAAAGACAGAGACAGCTTTCgaaagaaagagaatcaaAGGGGGAAACTTGGATTTCTAAACATTTTGTGGTGTCTCATAGTAAGGAAAAAGGGTGGGAATGCTCACCTATTCAAAGGTGGGTCCCTGCTGCCCCCGTCATAGCCTTCTA 1154 0.422 MVTEDKEKEEETKVVLTTPFSIGESDDVYRAPNLLQRILSLLKNVRPGSDLTRFQLPPLFNFPKSQLQCYGESVYSTSSDLLSKCNNGQNPLDRFTSVVAWSISTTRPAVFGVAPYNPILGETHHVSKGTLNVLLEQVSHHPPVAALHATDKEQNIEMIWCQHPNPKFNGTSVEAQVHGKRELKLLNHGESYEMNSPSLFIRVLPVPGIEWIGNVNISCQESGLVAELCYRSSFLGIGGKQRLIKGKIFDSSSLKVLYEVDGQWDSTVTVKDKNTGKVRVIYDAKEVISGLQTPILKDAESVRATESALVWGKLSQAIMNKDWEKARVAKQIIEERQRQLSKERESKGETWISKHFVVSHSKEKGWECSPIQRWVPAAPVIAF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00983 383 ProSitePatterns Oxysterol-binding protein family signature. 136 146 IPR018494 -
Bva05g00983 383 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 11 381 - -
Bva05g00983 383 Gene3D - 120 292 - -
Bva05g00983 383 SUPERFAMILY Oxysterol-binding protein-like 36 368 IPR037239 -
Bva05g00983 383 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 11 381 IPR000648 GO:0008289
Bva05g00983 383 Gene3D - 303 373 - -
Bva05g00983 383 Pfam Oxysterol-binding protein 40 313 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00983 Bva-Chr5 5027623 5030551 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00983 K22285 - gmx:100780927 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00983 05 5027623 5030551 Bva06g00667 06 6498129 6500471 BWGD
Bva05g00983 05 5027623 5030551 Bva05g00983 05 5027623 5030551 ECH