Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00744 ATGGGGTTTCGTGTGAGCATGTTATGGTGGGTATTGTTGGGATTACTAGTTCATTTAGAGAGTAATGGGAGTTTTGGGTGCTTAGAAGCAGAGAGGAATGCACTGCTGCTGCTAAAAGCTGCTTTCAATCACCCAGATGGCTCTGCTCTCCCTTCATGGAATGGCGAGCACAGCGAGTGTTGTAATTGGGAGAGAGTGATATGCGAAAATACCTCCACAAACGCCAAGCGAATAACCCAACTTCTCCTGAATAACACTAGAGATTTTCAATTGGCAATTGCAGATTGGTCCCTTAATACCTCCTATTTGCTTCCCTTCCAACAACTTCAACTGTTGGACTTGTCCTGGAACTATATGACAGGTTTTGTGGGAGTGATCATATCTGAAAAGttgcaaattttaagattaaatggGAACAAGTTGACACAAGTTCCATCCTTTGGTGCATTACCATCCCTTAAAGTACTAGATTTATCCTTCACAGGTTTAACAAATTTTCGTTTTCTGTCAGAGCTTTCTACTATGACCAAACTGGAGGTGCTGGACCTTGGGAATAATTTACTCACTGGAACCCTTTCGGACGCAATTGGAAACCTCACCTTTCTAAaagctctctctctttctgccAACAATTTGGTTGGTTCTTTAGCATCTGAAGGAAACTTATGCAAGCTCAAGAGTCTTCAAGAGTTGGATCTTAGTCGCAATCAGTTTCTGGGAAATCTTCCTTCATGCCTCATCAATCTGACCTCTCTTCGTGTATTTGATATTGCAAACAACGGTTTTGAAGGAATCTTCCCTTCCTTGCTTTTATCAAGTCTGAAATCACTAgcatatatatctctttcctACAACTACTTTCATGGCTCCTTTCCATTTGCTTCACTTACTAACCACTCCAACCTTGAAGTGTTTGATCTTTTGAGTTCTAATTCTCGTTTGAAGGTTGAAACTGAGACTCTGCCCTTCATTCCTCCATTTCAGTTGAAAGTCTTTCGCTTATCAAATTGCATAGTCAATGAACCCACTAAGGTCATTCCAAGCTTTCTGTTATATCAATCTGAATTAAGAATAGTCGATCTCAGTTATAATAGCATCACAGCAAAGTTCCCACAATTTCTActgaaaaataatacaagaTTAGAATATCTGAGCCTTAGCAACAACTTTTTCACTGGCCCCTTTGAGCTCAATTCCACCTTAAAATATCCACACATGAATTTCTTAGATATATCCCACAATCCCATTAAAGGAAAGGTTCCTTCTTGCATTGGTTCTGTCCTTCCAAATTTAAGGATCATGAACATGTCCAAAGCTGAATTACAAGGCGTAATTCCAAGTTCAATGGGAGATATGGGGCTGCTAATGTTACTAGACTTCTCAGCAAACAATTTCTCAGGCGAATTGCCAGAGGAGCTGGTTATGGGAGGCAACTCACTGGAATTTCTCAAGTTATCTAACAACCATTTGAATGGCACAATATCATCTGCAAAATCCAACTTGGGTGCTCTAAAAATTTTACGGCTAGACAACAATCACTTCACTGGCTCTATCTCAACTGTGTTCTTCAACAGTTCTCCGTTAACAGTATTGGACCTTAGCAACAATGATCTAAATGGGAACCTGCCTACTTGGATTGGAAACTTTCAGCGATTAAGTTCCCTAGTTTTGTCCCGGAATTCGTTGCAAGGTCCTTTACCACTAGATTTCTGCAAATTGAACAGGCTCACATACATAGATCTCTCCAAAAATCATCTCAATGGCACTTTGCCTAGttgttttgatatgaaaagCCTTAGGTACTTGCATTTGCAGGGTAATCAGTTCTCAGGGCCCATACCATATGTTCTAACCAATTCTTCAGTCTTGCTGACATTGGATTTGAtgaacaacaaattttcagGTGAAATCCCTAGTTGGATTGGCTCTTTTGCAAAATTGAGAGTTCTCCTTCTAAAAGGAAACACCCTTCAAGGTCCCATTCCTGTTGATATATGTCAACTAAAGCGTATCAGTATTTTAGATCTTTCCCACAATAATCTTTCAGGAGGAATACCTTCATGTTTGAATGTTGTGTCACCAGGACTGTTGGAACCTCTGGATGGCGCCATATTAGGAGAATATTTCATAATGGTGCCCGTTAAATTCACCAGATTATCATTTCAGAGTCTAATTTATCTATATGATGGAATCAATATGCAAGTTCTTGTCTCAGATGAGGAACAAGAAGTGGAATTCATGTCAAAGAGCAGGTTTGAATCCTATAAAGGAAATATCTTGTACTACATGTCTGGGATAGACCTGTCCTGTAATATGTTCACAGGTTCAATTCCTCCTCAAATTGGTTATCTCAGTAGTATCCACACCTTAAACCTTTCGAACAACCAATTAAGTGGGTCCATCCCAGAAACATTTTCCAACCTCAGACAGATCGAAAGCTTAGATCTTTCTTACAACAGATTGAATGGTCGGATTCCTCCACAGTTGGTGGAGCTGTACAGCTTGTCTGTGTTCTTTGTGGTTCATAATAATCTTTCTGGAAGCACACCAGAGAGGAAGTTTCAATTTGCAACTTTTGGACAGAGCAGTTATGAGGGAAATCCTTTTCTCTGTGGACCTCCGCTGGAACGAAGTTGTATATCTGATGGAGAAGCTTCAAGGACGATGAAAGCTTCAGACGGGAAACGAGATGAGTTTATATCTACCTTCTTCTGGAGTTTCGGAGCATCTTTTGTTGTTGCATTTCTAGGTGTCATTGCTTTTCTACACTTCAACTTtgattcaagaaaattttacattagaaagcaGCCGACGACCCAACCAAACCAAGCTCATATTCGGTCGAATTTTCTCTGTCTGGTCGCATACCAGTCtcccttcccttcccttctTGCCTCTTCGTCTCTCTCAGCTCAATTCAGGTTCAGAAAAATTTGTGATCGAGAGGGGGAGAAAATGTCAGGAGGAGGCACGCAGAAGAGTCTGAGAAAAGCGCTTGGAGCCCTTAAGGACACGGCAACAGTTTCATTGGCCAAAGTCAACAATGATTACAAGGAGTTGGACATTGCTATAGTTAAAGCCACAAATCACGTTGAACGACCAGCAAAGGAAAGACACATAAGAGCTGTTTATTCAGCAATCTCAGCTACAAGACCCCGTGCTGATGTTGCGTATTGCATTCACGCTCTTGCCAGACGATTGTCTAAGACACATAACTGGGCGGTTgcattaaaaactttaattgttattcaTCGTGCTCTGAGGGAAGTGGATCCCACATTTCATGAGGAGTTCATTAACTATGGCAAAACCAGAAGTCATATGCTCAACATGGCTCATTTCAAAGATGATTCCAGTCCAAATGCTTGGGATTATTCTGCATGGATCCGTGCTTATGCATTGTTTTTGGAGGAAAGGCTGGAATGTTTTCGCGTATTGAAGTATGATGTTGAGATAGATCGTCCTAGGACCAAAGATTTGGATACTGCAGAATTGCTTGAGCAGTTGCCAGCTTTACAACAACTTCTCTTTCGAGTTCTTAATTGCCAGCCACACGGAGCAGCTGTTAATAACATTGTCATTCATTTAGCACTGTCAATGGTTGCTTTAGAAAGCATCAAAATTTATCAAGCTATTAATGATGGAACTGTCAATATGATTGATAAGTTTTTTGAGATGCAACGCCACGATGCTATGAAAGCTCTTGAAATATACAGGAGGGCCGGGCAGCAGGCTGAGAGATTGTCGGAGTTTTATGAAATGTGTCGAAATCTTGATATTGGACGTGGAGagaagtttttaaaaattgagcaGCCCCCTGCATCATTTCTACAAGCCATGGAAGAGTACGTCAAAGAAGCTCCCCGGGTCTCAACAGTCCGTAAGGATCAGGCTGTTGACAACAAAAGTTCCCCTCCAAAAGAAGTTTTGTCTATAGAATACAAAAAGTCACCAGAGGCAAAGGAGGAACGTCCAGAATCACCAGCTCCTCCTCCAGCTCCAGAACCTGTAAAAGTGGAAGCACCTGCAGCACAACCACCACCTGATCTACTGAATTTGGATGATACTGTTCCAGCTGCTTCAGAGCTGGAAGAGAAGAATGCCTTGGCTCTGGCCATTGTTCCAGTTGTGATGGCAGATCAACCAACTCCTGCTGTTACAAATCAAGCAAATGGAACTACAGGCTGGGAATTGGCCCTTGTTACATCCCCAAGTTCAAATGAGAGCGCTACGGCAGCTAGCAAACTGGCGGGAGGGTTGGACAAGCTTACACTAGACAGCTTGTATGATGACGCAATCAGAAGAAGAAACCAGAATGTGAGCTATAACCCGTGGGAGCCAGCACCAGCAGGGGCCTTGATGCCACAGACAATGCATGATCCTTTTTATGCCTCTAACGCAATGGCTGCTCCACCGTCTGTTCAGATGGCAGCTATGTCGAATCAGCAGCAGGCCTTCATgttgcagcagcagcagcagcagatgatgatgatgggcCATCAACAACCTTCTGTAAATCCCTTTGGAAATCCATATGGAGCCACTGTCTACCCCTATGGCTCAGGTATGCCTGTTCAAGCATACAATAATCCATACAAGGGCTTCATCTA 4610 0.402 MGFRVSMLWWVLLGLLVHLESNGSFGCLEAERNALLLLKAAFNHPDGSALPSWNGEHSECCNWERVICENTSTNAKRITQLLLNNTRDFQLAIADWSLNTSYLLPFQQLQLLDLSWNYMTGFVGVIISEKLQILRLNGNKLTQVPSFGALPSLKVLDLSFTGLTNFRFLSELSTMTKLEVLDLGNNLLTGTLSDAIGNLTFLKALSLSANNLVGSLASEGNLCKLKSLQELDLSRNQFLGNLPSCLINLTSLRVFDIANNGFEGIFPSLLLSSLKSLAYISLSYNYFHGSFPFASLTNHSNLEVFDLLSSNSRLKVETETLPFIPPFQLKVFRLSNCIVNEPTKVIPSFLLYQSELRIVDLSYNSITAKFPQFLLKNNTRLEYLSLSNNFFTGPFELNSTLKYPHMNFLDISHNPIKGKVPSCIGSVLPNLRIMNMSKAELQGVIPSSMGDMGLLMLLDFSANNFSGELPEELVMGGNSLEFLKLSNNHLNGTISSAKSNLGALKILRLDNNHFTGSISTVFFNSSPLTVLDLSNNDLNGNLPTWIGNFQRLSSLVLSRNSLQGPLPLDFCKLNRLTYIDLSKNHLNGTLPSCFDMKSLRYLHLQGNQFSGPIPYVLTNSSVLLTLDLMNNKFSGEIPSWIGSFAKLRVLLLKGNTLQGPIPVDICQLKRISILDLSHNNLSGGIPSCLNVVSPGLLEPLDGAILGEYFIMVPVKFTRLSFQSLIYLYDGINMQVLVSDEEQEVEFMSKSRFESYKGNILYYMSGIDLSCNMFTGSIPPQIGYLSSIHTLNLSNNQLSGSIPETFSNLRQIESLDLSYNRLNGRIPPQLVELYSLSVFFVVHNNLSGSTPERKFQFATFGQSSYEGNPFLCGPPLERSCISDGEASRTMKASDGKRDEFISTFFWSFGASFVVAFLGVIAFLHFNFDSRKFYIRKQPTTQPNQAHIRSNFLCLVAYQSPFPSLLASSSLSAQFRFRKICDREGEKMSGGGTQKSLRKALGALKDTATVSLAKVNNDYKELDIAIVKATNHVERPAKERHIRAVYSAISATRPRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPTFHEEFINYGKTRSHMLNMAHFKDDSSPNAWDYSAWIRAYALFLEERLECFRVLKYDVEIDRPRTKDLDTAELLEQLPALQQLLFRVLNCQPHGAAVNNIVIHLALSMVALESIKIYQAINDGTVNMIDKFFEMQRHDAMKALEIYRRAGQQAERLSEFYEMCRNLDIGRGEKFLKIEQPPASFLQAMEEYVKEAPRVSTVRKDQAVDNKSSPPKEVLSIEYKKSPEAKEERPESPAPPPAPEPVKVEAPAAQPPPDLLNLDDTVPAASELEEKNALALAIVPVVMADQPTPAVTNQANGTTGWELALVTSPSSNESATAASKLAGGLDKLTLDSLYDDAIRRRNQNVSYNPWEPAPAGALMPQTMHDPFYASNAMAAPPSVQMAAMSNQQQAFMLQQQQQQMMMMGHQQPSVNPFGNPYGATVYPYGSGMPVQAYNNPYKGFI 1536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00744 1536 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Bva05g00744 1536 Gene3D Ribonuclease Inhibitor 310 474 IPR032675 -
Bva05g00744 1536 PRINTS Leucine-rich repeat signature 528 541 - -
Bva05g00744 1536 PRINTS Leucine-rich repeat signature 808 821 - -
Bva05g00744 1536 SMART LRR_typ_2 150 170 IPR003591 -
Bva05g00744 1536 SMART LRR_typ_2 225 249 IPR003591 -
Bva05g00744 1536 SMART LRR_typ_2 573 596 IPR003591 -
Bva05g00744 1536 SMART LRR_typ_2 784 807 IPR003591 -
Bva05g00744 1536 SMART LRR_typ_2 129 149 IPR003591 -
Bva05g00744 1536 SMART LRR_typ_2 808 832 IPR003591 -
Bva05g00744 1536 SMART LRR_typ_2 668 699 IPR003591 -
Bva05g00744 1536 SMART LRR_typ_2 501 524 IPR003591 -
Bva05g00744 1536 SMART LRR_typ_2 175 198 IPR003591 -
Bva05g00744 1536 Gene3D Ribonuclease Inhibitor 25 128 IPR032675 -
Bva05g00744 1536 Gene3D Ribonuclease Inhibitor 129 309 IPR032675 -
Bva05g00744 1536 SUPERFAMILY L domain-like 426 519 - -
Bva05g00744 1536 PANTHER CLATHRIN ASSEMBLY PROTEIN 986 1515 IPR045192 GO:0048268|GO:0072583
Bva05g00744 1536 PANTHER OS06G0175500 PROTEIN 986 1515 - -
Bva05g00744 1536 Pfam Leucine Rich Repeat 177 199 IPR001611 GO:0005515
Bva05g00744 1536 SUPERFAMILY GAT-like domain 1155 1286 - -
Bva05g00744 1536 ProSiteProfiles ENTH domain profile. 1012 1150 IPR013809 -
Bva05g00744 1536 Gene3D - 993 1150 IPR008942 -
Bva05g00744 1536 ProSiteProfiles Leucine-rich repeat profile. 130 151 IPR001611 GO:0005515
Bva05g00744 1536 SUPERFAMILY L domain-like 496 854 - -
Bva05g00744 1536 MobiDBLite consensus disorder prediction 1312 1328 - -
Bva05g00744 1536 Pfam ANTH domain 1019 1285 IPR011417 GO:0005543
Bva05g00744 1536 Pfam Leucine Rich repeats (2 copies) 130 169 IPR025875 -
Bva05g00744 1536 Gene3D Ribonuclease Inhibitor 475 887 IPR032675 -
Bva05g00744 1536 MobiDBLite consensus disorder prediction 1329 1343 - -
Bva05g00744 1536 SMART LRR_bac_2 784 804 - -
Bva05g00744 1536 SMART LRR_bac_2 128 147 - -
Bva05g00744 1536 SMART LRR_bac_2 225 245 - -
Bva05g00744 1536 MobiDBLite consensus disorder prediction 1289 1352 - -
Bva05g00744 1536 SUPERFAMILY ENTH/VHS domain 1019 1150 IPR008942 -
Bva05g00744 1536 Pfam Leucine rich repeat 766 821 IPR001611 GO:0005515
Bva05g00744 1536 Pfam Leucine rich repeat 504 562 IPR001611 GO:0005515
Bva05g00744 1536 Pfam Leucine rich repeat 624 681 IPR001611 GO:0005515
Bva05g00744 1536 SMART enth_2 1018 1150 IPR013809 -
Bva05g00744 1536 Gene3D ANTH domain 1152 1303 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Bva05g00744 1536 SUPERFAMILY L domain-like 50 422 - -
Bva05g00744 1536 CDD ANTH_N 1020 1143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00744 Bva-Chr5 3731506 3743634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00744 6 935 Miscellaneous Gene Families AT1G74190 38.359 2.19e-165 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00744 K20043 - aip:107615318 1186.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00744 05 3731506 3743634 Bva06g00783 06 7192198 7196728 BWGD
Bva05g00744 05 3731506 3743634 Bva05g00744 05 3731506 3743634 ECH