Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00640 ATGGTGGCAACAGCTGCTACTTCTGCGTTTTTCCCTGTTACTTCATCCTCACCAGACTCTGGTGTAAAGCCCACCAAACTTGGTGGTGGGCCTGCCAACCTTGGAGGACTCAAATCGACGCCTCCTTCTTCTCGTAGCTTGCAAGTTAAGGCAAATGCCCAAGCCGCTCCAAAAATTAATGGAACTGCCGTTGTTAAACCTGTTGAAGATGTGAAGCAAGATGATGATGTTCCATCACCTGCACCAAGGACTTTCATTAACCAGTTACCTGATTGGAGCATGCTACTTGCTGCTATAACAACAATTTTCTTGGCCGCAGAGAAGCAGTGGATGATGCTTGATTGGAAGCCAAGGCGATCTGACATGCTTATTGATCCATTTGGAATAGGAAAAATTGTAGAGGATGGTTTCGTGTTTCGGCAGAATTTTCCTATTAGATCATATGAAATAGGTGCTGATCGAACTGCATCTATAGAGACGGTAATGAACCATTTACAGGAAACTGCGCTTAATCATGTCAAGACTGCTGGGCTTCTTGGTGATGGCTTTGGTTCTACGCCAGAGATGTGCAAAAAGAACCTGATATGGGTGGTTACTCGGATGCATGTTGTGGTTGATCGTTATCCTACATGGGGTGATGTTGTTCAAGTAGACACTTCGGTCTCTGCATCTGGAAAAAATGGTATGCGTCGAGATTGGCTTTTGCGCGATTACAAAACTGGTGAAACCCTGACAAGAGCCTCCAGTTTATGGGTCATGATGAATAAACTGACTAGGAGGATATCTAAAATTCCGGAAGAAGTCAGAGGGGAGATACAGTCATATTTTGTGGATTCTGATCCTGTTGTGGAAGAGGATAGCAGAAAACTACCCCAGCTTGATGATGATACAGCAGATTATGTTCACTCTGGTTTAACTCCTAGGTGGAGCGATTTAGATGTCAATCAGCATGTTAATAATGTGAAGTACATTGGCTGGATCTTGGagAGTGCTCCTCGGTCAATCTTGGAGAGTCATGAACTTGCTTCTATAACTTTACAATATAGGAGGGAGTGTGGTAGAGACAGTGTGCTGCAGTCTCTGACTGCTGTCTCTGGTGCTGATGTTGGCAATTTAGCTCACAGCGGAGAAGTGGAGTGTAAGCATTTGCTTCGACTCGAAGATGGCCCTGAGATTGTGAAGAGTAGGACCGAGTGGAGGcccaaaaaaatgaacaacttTGATGTTGTCAATCTGGGTCCGGCAGAAAGAACCTA 1256 0.4419 MVATAATSAFFPVTSSSPDSGVKPTKLGGGPANLGGLKSTPPSSRSLQVKANAQAAPKINGTAVVKPVEDVKQDDDVPSPAPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLIDPFGIGKIVEDGFVFRQNFPIRSYEIGADRTASIETVMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTRMHVVVDRYPTWGDVVQVDTSVSASGKNGMRRDWLLRDYKTGETLTRASSLWVMMNKLTRRISKIPEEVRGEIQSYFVDSDPVVEEDSRKLPQLDDDTADYVHSGLTPRWSDLDVNQHVNNVKYIGWILESAPRSILESHELASITLQYRRECGRDSVLQSLTAVSGADVGNLAHSGEVECKHLLRLEDGPEIVKSRTEWRPKKMNNFDVVNLGPAERT 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00640 418 CDD 4HBT 139 255 - -
Bva05g00640 418 Pfam Acyl-ACP thioesterase 137 400 IPR002864 GO:0006633|GO:0016790
Bva05g00640 418 MobiDBLite consensus disorder prediction 1 46 - -
Bva05g00640 418 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 133 284 IPR029069 -
Bva05g00640 418 Pfam Acyl-ATP thioesterase 1 125 IPR021113 GO:0016790
Bva05g00640 418 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 302 406 IPR029069 -
Bva05g00640 418 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 1 405 - -
Bva05g00640 418 MobiDBLite consensus disorder prediction 1 22 - -
Bva05g00640 418 Gene3D Hotdog Thioesterase 129 406 - -
Bva05g00640 418 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 405 IPR045023 GO:0006633|GO:0016297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00640 Bva-Chr5 3184933 3190269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00640 1 402 Acyl Lipid Metabolism Gene Families AT1G08510 78.025 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00640 K10781 - gmx:100170693 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00640 05 3184933 3190269 Bva05g00640 05 3184933 3190269 ECH