Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00632 ATGGTTACTGAAACACTGAATGTGAGTCGTCTAACAAATGGGGAAGCTGAGAACAGTCTACACAAGCAAACTGACGAAGTTCCTTCCAAAGGTTTTATTGGAAAACGTGAAAACGTGCTGTCCGATGGAACCAATGGTACCCTTTGTAATGATGGAAACCTAGGGGAAGTATCAAATAGTCCTGAAGCAAAATCACAGTCTGATGCCGTATCTAAAAGGGCCAGGCAGCAGAAGGAAGTGACTCTTGAAGATATGTATAACAACCAAGACCTGTTTGACGAGGATGACGATGATGACAGTGACTGGGAACCCTTACAAAATCGTGTGGAACTCATTAAGTGGTTTTGCAGAAACTGTACCATGGTTAACCTTGATGATGTCGTCTATTGTGACATATGTGGAGAACATAAGGATTCCAAAATCCTGAGCTATGGTTTTTTTGCATCTCCCTTTGCAGAAGAGATGGATACCCCAGAGGTTGAGTCAATaacgaaagaaagacaaaaagATGTTGGCTCAAAAGATTCAGTAACAAATGGTTCCACAGCAATTGGCTTTGATGAGAGGATGTTGCTACATGCAGAAGTTGAAATGAAGTCACATCCACATCCTGAAAGACCAGATCGTCTTCGAGCAATTGCTGCTTCTTTTGCTAGAGCTGGTATTTTTCCTGGAAGATGCTACCCAATCACTGCCAGAGAAATCACGCCAGAAGAACTACAAATGGTTCATACTTTGGAGCATATTGAAGCAGTGGAAATTACAAGCCAACTAATTTCAAGTTATTTCACCCCTGACACATATGCCAATGAGCATTCAGCACGTGCTGCAAGGCTTGCAGCTGGGTTATGCGCTGATCTGGCATCATCTATTGTTTCAGGACGTGCTAAAAATGGTTTTGCATTGGTTAGGCCTCCTGGTCATCATGCTGGAGTGAAACAGGCTATGGGGTTTTGCCTTCATAATAATGCCGCAGTTGCAGCATTGGCTGCTCAGGTTGCTGGAGCTAGGAAGATTCTAATTGTAGATTGGGATGTTCATCATGGCAATGGCACACAGGAAATATTTGATTCAAACAAATCGGTACTGTATATATCATTGCATAGGCATGAGGGAGGAAGGTTTTATCCTGGTACTGGAGCTGCTGATGAGgtTGGTACCATGGGTGCAGAAGGATACTGTGTTAATATTCCTTGGAGTCGAGGGGGAGTTGGTGacaatgattatattttttcttttaagcatGTTGTCCTTCCAATAGCTACTAAGTTTGCTCCTGATCTCACCATCATATCAGCGGGATTTGATGCTGCCAGAGGTGATCCACTTGGATGTTGTGATGTTACTCCTAATGGTTATGCACAAATGACACACATGTTGAATACTCTTTCTGATGGAAAGTTGCTTGTCATTCTTGAGGGGGGTTATAATCTACGGTCTATATCATCTTCTGCCACTGCTGTAATCAAGGTATTGCTGGGTGACAATCCTGGATTTGAACTGGAAAACAGCTTCCCTTCCAGAGCTGGCCTACAGACTGTTATGGATGTCcttgaaattcaaatgaagTTTTGGCCTGCGTTACAACCCACTTTAATGGATCTGCGTTCTCAATGGGGAATCTACTGCCTTGATAATAAAAgaagacagatgaagaaaaagagacgTCGGTTCGTGGCACCAATATGGTGGAAGTGGGGACCAAAAAGTTCATTATACCGTTTCCTAAATCGTCGTGTAAAATCGAAGTG 1751 0.4112 MVTETLNVSRLTNGEAENSLHKQTDEVPSKGFIGKRENVLSDGTNGTLCNDGNLGEVSNSPEAKSQSDAVSKRARQQKEVTLEDMYNNQDLFDEDDDDDSDWEPLQNRVELIKWFCRNCTMVNLDDVVYCDICGEHKDSKILSYGFFASPFAEEMDTPEVESITKERQKDVGSKDSVTNGSTAIGFDERMLLHAEVEMKSHPHPERPDRLRAIAASFARAGIFPGRCYPITAREITPEELQMVHTLEHIEAVEITSQLISSYFTPDTYANEHSARAARLAAGLCADLASSIVSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAQVAGARKILIVDWDVHHGNGTQEIFDSNKSVLYISLHRHEGGRFYPGTGAADEVGTMGAEGYCVNIPWSRGGVGDNDYIFSFKHVVLPIATKFAPDLTIISAGFDAARGDPLGCCDVTPNGYAQMTHMLNTLSDGKLLVILEGGYNLRSISSSATAVIKVLLGDNPGFELENSFPSRAGLQTVMDVLEIQMKFWPALQPTLMDLRSQWGIYCLDNKRRQMKKKRRRFVAPIWWKWGPKSSLYRFLNRRVKSK 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00632 583 ProSitePatterns Zinc finger RanBP2-type signature. 114 133 IPR001876 -
Bva05g00632 583 Gene3D Histone deacetylase domain 179 531 IPR037138 -
Bva05g00632 583 CDD HDAC_classII 203 493 - -
Bva05g00632 583 SUPERFAMILY Arginase/deacetylase 179 527 IPR023696 -
Bva05g00632 583 MobiDBLite consensus disorder prediction 1 18 - -
Bva05g00632 583 MobiDBLite consensus disorder prediction 1 77 - -
Bva05g00632 583 MobiDBLite consensus disorder prediction 40 67 - -
Bva05g00632 583 PRINTS Histone deacetylase superfamily signature 305 328 IPR000286 -
Bva05g00632 583 PRINTS Histone deacetylase superfamily signature 338 353 IPR000286 -
Bva05g00632 583 PRINTS Histone deacetylase superfamily signature 426 436 IPR000286 -
Bva05g00632 583 PANTHER HISTONE DEACETYLASE 57 581 - -
Bva05g00632 583 Pfam Histone deacetylase domain 203 491 IPR023801 -
Bva05g00632 583 PANTHER HISTONE DEACETYLASE-RELATED 57 581 - -
Bva05g00632 583 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00632 Bva-Chr5 3141094 3147880 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00632 - - qsu:112024699 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00632 05 3141094 3147880 Bva05g00632 05 3141094 3147880 ECH