Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00627 ATGGCGAAGCCTCGCAAGCCGAAGAACGAAGAATCTAAGCCCGAGAATTCAGGAGCTGTGGTTCACCATCAAAAGCTTTGTCTCTCCATCGACATGGACAAGCGTTTAGTTTACGGATATACTGAATTGGAGATTACGGTCCCGGAGATCGGGTTTGTTGGCTTGCACGCAGAGAATTTAGGCATCGAGAATGTTCTTGTTGATGGTGAGCCGGCGGCCTTCGAGTTTTACCCACatcagcaacaacaacaactagaaaatgataaaagatgGAGCTCCGCGTTTTGTCCCAGCTCTGCTGCCGACGCTGCAGGCTCGGTGTATTTGTCTGCACTAGAGAAAGAGATGGTGCcaaatttacttattaattgCTGCAAGCCTTTTAAGGCTGAAAGTGAACAGCAGGAGCAGCCCGTTTCTGAAAATGGGTATCATTCCTCTGGAGACATTGCCAAGCAGGTTGATGTTGGATGCAGAATGCGAGCAAGGTGTTGGTTCCCTTGTATAGATGACAATTCACAGCGATGCTGCTATGATCTGGAGTTCACGGTGGCACACAATCTTGTGGCTGTGAGCACTGGAAGCTTGCTATTTCAGGTCTTAAGTAAGGATAATCCTCCTCGTAaaacatatgtatataaattggATGTTCCAGTTGCTGCTCAGTGGATATCTTTGGCTGTTGCTCCATTTGAAATTCTTGCTGATAACCAAATTAGTCTCATATCACATATGTGTTTGCTGCCTAACTTGTCAAAGCTACGAAATACTGTGGAATTTTTCCATAGTGCATTCAGCTGCTATAAGGATTATCTTTCTGTAGAATTTCCATTTGACTCATATAAGCAAGTTTTCATAGAGCCGGAGATAGCGGTTTCATCCTTAAGTTCAGGAGCCTCCATGAGTATATTTAGTTCTCAAGTTTTGTTTGATGAGAAGGTTATTGACCAGACTATTGATACCAGGATAAAACTTGCCTATGCCCTTGCAAGACAGTGGTTTGGTGTGTATATCACTCCTGAGGCATCAACAGATGAGTGGCTCTTGGATGGTCTTGCTGGGTTCttaactgatttttttattaaaaaacatttgGGAAATAATGAGGCACGGTATCGGAGATACAAGGCAAATTGCGCTGTTTGTAAAGCAGATAATGCTGGAGCTACAGCTTTGAGCTGTTCAGCTTCTTGTAAGGACTTATATGGAACTCAGTCCATTGGTTTATATGGAAAAATAAGATCATGGAAGTCTGTGGCAGTTCTTCAAATGTTGGAAAAGCAGATGGGTCCTGAATCTTTCCGAAAAATTTTGCAGACAATAGTTTCTCGGGCTCAAGATAAATCTCGTTCTATGAAAACTCTTAGTACTAAGGAGTTTCGACATTTTGCGAATAAAGTTGGAAACCTTGAACGTCCATTTCTTAAAGAGTTCTTCCCTCGATGGGTTGGTTCATGCGGATGTCCAGTTCTAAGGATGGGGTTTTCCTATAACAAAAGGAAGAATATGGTTGAATTGGCAGTTCTCCGTGGATGCACATCATCACAAAATTCAGGTACACCAGTTCTTGATGGTTCTGATGGAGATGCTGGATGGCCTGGGATGATGAGTATCAGGGTCTATGAACTTGATGGTATGTATGACCATCCAATTCTTCCAATAGCTGGAGAAGCATGGCAACTGTTGGAAATACAATGCCACTCAAAGCTTGCTGCTAGGCGTATTCAGAAGCCTAAGAAAGGTTCAAAACTCGATGGCTCTGATGATAATGGTGAGGTACCTGCCATGGATATGCGCTCCAGTACCGAGTCCCCTTTATTGTGGATCAGAGCAGATCCTGAAATGGAGTATCTTGctgaaattcattttaatcagCCAGTACAGATGTGGATTAATCAATTGGAGAAAGACAAAGATGTTATAGCTCAGTCACAAGCAATTGCAACCCTGGAGGCATTGCCCCAGCTGTCATTTTCCATCGTGAATGCTCTTAACAATTTTCTTACAGACTCTAAGGCATTCTGGAGAGTTCGAATTGAAGCAGCATTTGCGTTGGCTAATACAGCATCTGAGGAAACGGATTGGGCTGGTTTACTGCATTTGGTTAAATTTTACAAGAGTCGAAGGTTTGATCCCGATATTGGACTCCCAAAGCCAAATGACTTTCACGACTTTCCTGAGTATTTTGTTCTTGAGGCCATTCCACATGCTGTAGCTACAGTCAGAGCTGCTGACAAGAAAAGTCCAAGAGAGGCTGTTGAATTTGTTTTACAGTTATTGAAGTACAATGATAACAATGGGAATCCTTATTCAGATGTGTTCTGGCTTGCTGCATTAGTCCAGTCAGTAGGCGCACTTGAGTTTGGGCAGCAGagtattcttcttttatcatcaCTACTCAAACGCATTGACCGACTTTTACAATTTGACAGGCTCATGCCAAGCTTCAATGGAATTTTGACAATCAGTTGTATCCGAACCCTGACTCAGATTGCAGTAAAGCTTTCAGGGTTCATTCCCCTAGATCGTGTCTATGAACTTGTAAAACCTTTTCGGGACTTAAAGACAATGTGGCAAGTTCGAATTGAAGCAAGCAGAGCACTTCTTGATCTCGAATTCCACTGCAAGGGCATTGATGCAgcattattgttatttgtcAAATACGTGGAAGACGAGCCTTCCTTAAGAGGGCAGGTAAAGTTAAGCATTCATGTTATGCGACTATGTCAAATGAGAGGTGTATTGAACAGTGATGATGAGGTTACAAGCCAAACACTTGAAGCTTTGCTTCATTTGCTAGAAGGTCAATTATCATTCAATAACGTCTTTCTCCGTCATCACTTGTTCTGCACATTACAAATTCTTGCCGGAAGACCACCAACTTTACACGGGGTACCTAGAGAAAACAGAATGTTGCATACGAGTCTTGCAGAAGCTTGCAATTATCAGAGAAACAATGTTATTGATTCAGAAAGTAAGCTTCCGGAACAGCCCAGCGCTAGCCAAAACCTTGCCCAGGATTTGACTTTGACAGAGGATCCAAAGGAAGAAGCACTTGCCAAAGCTCCTGAGGACACAGCCCATGAAGCTCCCAAAGAAGCACCTGTGGAAGCAACTGCTGAAGCTCCTGAAGAAGTTCTGGAAGCCCATAAAGAAGTACCTACAGAGCCTCCCAGGGAAGCGCCGAAGGAAGCTTCCAGTGAGCTTCCCAAGGAAGCTGATACAGTATCCAATGGGCAAGAACGGAAGAAGCCAGTTGTCAAGATCAGGGTCAGACAATCTTCTGCTACCAGTAGGGCTGATACTGATAATCAAATGGTGGAAAGGTCTTTAGGTGGGCGTCATGAAATTGATCATGGAGCTAGCAGTTCTGTTTCTGTGGATGCACCCCAGAGGAATTTTGCAGAGACTGTGAGCATTAGCAATCACAATATCGAGGAAGTTAATTCTTGGCACGATCGTGGTTCTCGCATGACTGCCAGCATTGGTAGTGCAAAATTTTTGAGCGATGGCGATGAACTGGTCAAGGAACTTCAATGCACTGCTGATTCAAGTGTAGTTTATTCACAACCTCGTGCTGAAGATCCATCATCTTCTAGCATTATTCAGGATAACAATATAGATGCTGATGCAAAACGATATGTCAGCCTCCGAACCCTTTCACTTGGAAGACCTGATCTTGATGGTGATTCATTGACTAGAGAAGTTTCTGTGcatgggaaagaaaagaaaaaggacaaggaaaagaaacggAAACGCGAAGACCATAAAGGTGGTGACCCAGAATATTTAGAGCGAAAACgattgaagaaagagaaaaagcgcaaagaaaaagagatggCAAAACTGCGAAttgaagaagcaaaaagaTCTTCTGCAGACTTGTCAAGTAAGAAAGAGGAACCTGGAATGGACACTGCAACCCCACAACCAAAAGCAAATGAACCCAGTGGATCTAAATCAGTAATCAGAGGGGCTGATAGTAAACCCGAAGCATCAGAAGGTACTTCTGCTCCGCCAAAATTtaggattaaaattaaaaaccgAATGGTCAGTAAGTCATA 4064 0.4092 MAKPRKPKNEESKPENSGAVVHHQKLCLSIDMDKRLVYGYTELEITVPEIGFVGLHAENLGIENVLVDGEPAAFEFYPHQQQQQLENDKRWSSAFCPSSAADAAGSVYLSALEKEMVPNLLINCCKPFKAESEQQEQPVSENGYHSSGDIAKQNVRIIRIHYWIEKAEAGIHFKITYDLEFTVAHNLVAVSTGSLLFQVLSKDNPPRKTYVYKLDVPVAAQWISLAVAPFEILADNQISLISHMCLLPNLSKLRNTVEFFHSAFSCYKDYLSVEFPFDSYKQVFIEPEIAVSSLSSGASMSIFSSQVLFDEKVIDQTIDTRIKLAYALARQWFGVYITPEASTDEWLLDGLAGFLTDFFIKKHLGNNEARYRRYKANCAVCKADNAGATALSCSASCKDLYGTQSIGLYGKIRSWKSVAVLQMLEKQMGPESFRKILQTIVSRAQDKSRSMKTLSTKEFRHFANKVGNLERPFLKEFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRGCTSSQNSGTPVLDGSDGDAGWPGMMSIRVYELDGMYDHPILPIAGEAWQLLEIQCHSKLAARRIQKPKKGSKLDGSDDNGEVPAMDMRSSTESPLLWIRADPEMEYLAEIHFNQPVQMWINQLEKDKDVIAQSQAIATLEALPQLSFSIVNALNNFLTDSKAFWRVRIEAAFALANTASEETDWAGLLHLVKFYKSRRFDPDIGLPKPNDFHDFPEYFVLEAIPHAVATVRAADKKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGALEFGQQSILLLSSLLKRIDRLLQFDRLMPSFNGILTISCIRTLTQIAVKLSGFIPLDRVYELVKPFRDLKTMWQVRIEASRALLDLEFHCKGIDAALLLFVKYVEDEPSLRGQVKLSIHVMRLCQMRGVLNSDDEVTSQTLEALLHLLEGQLSFNNVFLRHHLFCTLQILAGRPPTLHGVPRENRMLHTSLAEACNYQRNNVIDSESKLPEQPSASQNLAQDLTLTEDPKEEALAKAPEDTAHEAPKEAPVEATAEAPEEVLEAHKEVPTEPPREAPKEASSELPKEADTVSNGQERKKPVVKIRVRQSSATSRADTDNQMVERSLGGRHEIDHGASSSVSVDAPQRNFAETVSISNHNIEEVNSWHDRGSRMTASIGSAKFLSDGDELVKELQCTADSSVVYSQPRAEDPSSSSIIQDNNIDADAKRYVSLRTLSLGRPDLDGDSLTREVSVHGKEKKKDKEKKRKREDHKGGDPEYLERKRLKKEKKRKEKEMAKLRIEEAKRSSADLSSKKEEPGMDTATPQPKANEPSGSKSVIRGADSKPEASEGTSAPPKFRIKIKNRMVSKS 1353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00627 1353 Gene3D tricorn interacting facor f3 domain 20 99 IPR042097 -
Bva05g00627 1353 SUPERFAMILY ARM repeat 420 983 IPR016024 -
Bva05g00627 1353 MobiDBLite consensus disorder prediction 1090 1104 - -
Bva05g00627 1353 MobiDBLite consensus disorder prediction 1014 1087 - -
Bva05g00627 1353 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 17 228 IPR042097 -
Bva05g00627 1353 Coils Coil 1263 1297 - -
Bva05g00627 1353 MobiDBLite consensus disorder prediction 576 597 - -
Bva05g00627 1353 MobiDBLite consensus disorder prediction 1014 1106 - -
Bva05g00627 1353 MobiDBLite consensus disorder prediction 577 591 - -
Bva05g00627 1353 MobiDBLite consensus disorder prediction 1275 1300 - -
Bva05g00627 1353 Gene3D - 622 935 IPR011989 -
Bva05g00627 1353 MobiDBLite consensus disorder prediction 1221 1353 - -
Bva05g00627 1353 MobiDBLite consensus disorder prediction 1227 1267 - -
Bva05g00627 1353 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 249 491 - -
Bva05g00627 1353 Gene3D Neutral Protease Domain 2 235 486 IPR027268 -
Bva05g00627 1353 Pfam Peptidase family M1 domain 258 456 IPR014782 GO:0008237|GO:0008270
Bva05g00627 1353 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 16 1285 IPR037813 GO:0005669
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00627 Bva-Chr5 3090848 3105435 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00627 K03128 - gmx:100792795 2083.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00627 05 3090848 3105435 Bva05g00627 05 3090848 3105435 ECH