Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00622 ATGGACTGGAGTGTAAACAGCCAGTACAGAACTTACAAAGATGAACATAAATCCATGATGGACGTTGCACTCATTTCAAACATGGATACGGTAAATATTGGACTTGGTTCTTCAGAAAAGGCAAACTCAATTAGTTCAGTAAAGCCGAGAAAGAAGACAATGACATCAGTTTATCTGAAGTATTTTGAGACTGCTCCAGATGGGAAGAGCCGGAGATGCAAGTTTTGCGGACAGAGCTACTCTATTGCAACAGCCACAGGCAATTTGGGAAGACATCTTGCCAATCGCCATCCAGGATATGGTAAGTCAGGGGATGCAGTCAGCAATTCATCAATCCAACCCGCTGCTGTGGTCAAGAAGCCTCAACCTCAAGGAAAAGCAAACCAGGTGGATTATGATCATCTAAATTGGTTGCTCATTAGATGGCTTGTCTTAGCTTCTCTCCCTCCTTCAACACTGGAGGAGAAGTGGCTCGCAAATTCCTATAAGTTTCTAAATCCTTCTATACAACTCTGGCCAAATGAGAAGTACAAATCAGTACTTGATGAAGTTTTCAGAAGCATGAGAGAAGACGTAAGAGAATTACTAGATCCAGTTTCCTCCAAATTCTCAATTACACTTGATTTCTGGAATTCCTTTGAACAGATCTTCTATATGAGCGTCACATGTCAATGGATTGACGAAAACTGGTGCTTCCAAAAAGTGCTTCTTGATATTTGTCGATTACCCTATCCATGTGGGGATACAGAGATATATCACTCCCTTGAAAAAGTTCTTAAAATGTACAACATTGAAAATAGAGTCCTGTCCTGTACCCATGATAACAGTCAAAATGCCATGCATGCCTGCCATACTTTGAAGGAGACCTTGGACAGTCAGAAGGTGGGGCCGTTCTGTTATATTCCTTGTGCTGCTCGAACTTTGAACTTGATAATAGATGATGGATTGAGGTCCACGAAACCATTGATCTCCAAGATACGGGAGTTCCTAATAGAATTAAATGCATCCTCAGTTATCTCTGatgattttattcaaatgtcTATAGCTTATCAGGAAGGTACTTGGAAATTTCCATTTGATATTTCAGCCAGGTGGAGTGGAAATTACCAGATGCTTGACATTGTTCGAAAGGCAGGTAAATCTATTGATGCAGTCATCCGTAAATATGAGGAAACGCTAGGTAGTAGGATGATGCTGACCTCTTCGGAGAAAAATGTGGTTAGCATTATGCATCAGTATCTGGAACCGTTTTACAAGACCACAAACGACATATGCACTAGTAAAGTACTAACAGTAGGCCTGGTCCTCTTCTTCATGGATCACATCTCAGAAACCATTGCTGCTTGTAGAGAATGCCGTCATAGCCCAGACTGGCTAAAAAGTGCTGCAGAAGAAATGGCTAAAAAGTCCAGAAGTTACATTACTCAGGTTTGCGACACATTCACGTATATGACAGCAATACTGGATCCTCGAATCAAGGGAGAGCTAATTCCTGAGAGCTTAAACTCAGAAAATTTCGTAGAGGAAGCAAGAAGCCATTTTATGAGGAATTATTCTGCCAGCCATTTCCCACCAATGAGTACTGGATACAATGCTCAGGAAATTGAAGATGGGGGAAGTGTTTCCTTTGCAGAGGAAATAGCTCGCAAGAAACGACGGGCAAGCATGAGCTCTGCCACCGATGAGCTCACTCAGTATCTGTCGGAGGCTCCAGCACCAATACCAACAGATGTTCTCGAGTGGTGGAAGGTGAATAGTACTCGCTACCCACGACTATCTGTGATGGCCAGGGATTACCTTGCCGTGCAGCCCACTTCAGTTGTGCCCGAAGAACTTTTCTGTGATAAGGGCGATGAGATTGACAAACAACGCTTCTGTATGCCACACGATAGTACACAAGCTATTCTTTGTATAAAGTCTTGGATTCAGGTAGGcatcaagtttaaatttaagtcGACTGAGATAGATTATGAGAGGCTGATGGAACTGGCAGCTGCTACCACTACAGACAATACCATTACCACTTCCGAcaagaagcaaaaata 2045 0.4171 MDWSVNSQYRTYKDEHKSMMDVALISNMDTVNIGLGSSEKANSISSVKPRKKTMTSVYLKYFETAPDGKSRRCKFCGQSYSIATATGNLGRHLANRHPGYGKSGDAVSNSSIQPAAVVKKPQPQGKANQVDYDHLNWLLIRWLVLASLPPSTLEEKWLANSYKFLNPSIQLWPNEKYKSVLDEVFRSMREDVRELLDPVSSKFSITLDFWNSFEQIFYMSVTCQWIDENWCFQKVLLDICRLPYPCGDTEIYHSLEKVLKMYNIENRVLSCTHDNSQNAMHACHTLKETLDSQKVGPFCYIPCAARTLNLIIDDGLRSTKPLISKIREFLIELNASSVISDDFIQMSIAYQEGTWKFPFDISARWSGNYQMLDIVRKAGKSIDAVIRKYEETLGSRMMLTSSEKNVVSIMHQYLEPFYKTTNDICTSKVLTVGLVLFFMDHISETIAACRECRHSPDWLKSAAEEMAKKSRSYITQVCDTFTYMTAILDPRIKGELIPESLNSENFVEEARSHFMRNYSASHFPPMSTGYNAQEIEDGGSVSFAEEIARKKRRASMSSATDELTQYLSEAPAPIPTDVLEWWKVNSTRYPRLSVMARDYLAVQPTSVVPEELFCDKGDEIDKQRFCMPHDSTQAILCIKSWIQVGIKFKFKSTEIDYERLMELAAATTTDNTITTSDKKQK 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00622 681 Pfam hAT family C-terminal dimerisation region 562 642 IPR008906 GO:0046983
Bva05g00622 681 PANTHER BED ZINC FINGER AND HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 32 652 - -
Bva05g00622 681 Pfam Domain of unknown function (DUF4413) 425 505 IPR025525 GO:0003677
Bva05g00622 681 Pfam BED zinc finger 56 98 IPR003656 GO:0003677
Bva05g00622 681 SUPERFAMILY Ribonuclease H-like 189 644 IPR012337 -
Bva05g00622 681 PANTHER BED FINGER-RELATED 32 652 IPR045259 -
Bva05g00622 681 SMART bed5 53 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00622 Bva-Chr5 3070889 3075709 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00622 - - jre:109010516 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00622 05 3070889 3075709 Bva05g00622 05 3070889 3075709 ECH