Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00608 ATGGCTTACAAATCCTTGGGCTCTATCACTCTGTTCGATATTGAATCTCTTGGAATTGCAGCACAAGATGCTGCGAGACTCCATGCAACTCTTACGGAAATCATTCGGATTCACGGAGCTGGCACTCCGGAAACCTGGCACCATATCACAAAGCGCGTCCTCAATCCTCAGCTTCCCTTCTCCTTCCATCAGATGCTTTACTATGGCTGCTACAAGGACTACGGTCCCGATCCACCCGCTTGGCTACCCGACCCGAAAAATGCTGTCTTAACAAATGTTGGCCAGCTACTGGAAAGGAGGGGGAAAGAGTTTTTGGGTTCAGCATATAAGGATCCAATTACAAGCTTTTCTGATTTCCAGAAATTTTCAGTCTCAAACCCTGAGGAATACTGGACAACTGTGCTAGATGAAATGGACGTATCGTTTTCAAAGCAACCTGAATGCATCTTACAGGAGAATCTCCCAGGAGGGAGCCATTTATCAAACCCATGTGGGCAATGGCTCCCTGGAGCATTTCTTAATCCGGCAAAGAATTGCTTAAATCTAAATGGTAAGAGAAGATTGAATGATCCAATGATAATATGGCGTGATGAAGTACACAACGATCTTCCTGTACATAGGATGACACTCAAGGAATTGCGCCAAGAGGTTTGGTTAGTTGCATATGCGCTTCAAGCACTGGGCCTGGAGGAAGGATCTGCGATTGCAATTGATATGCCAATGAATGTTACATCTGTGGTCATCTACCTGGCTATTGTTCTGGCAGGTTATGTCGTTGTATCCATTGCTGATAGTTTTGCAGCGCGTGAAATATCAACCAGgcttaaaatatcaaaagcaaAAGTCATATTTACTCAGGATCTCATTATTCGCGGTGACAAACGCCTCCCCTTGTACAGTAGAGTTGTGGATGCGCAGTCGCCTATGGCAGTTGTTATCCCCTCCCAAGGTTCTGGCTTTAGCATGAAATTGCGCAGTGGTGATCTTTCTTGGCATGATTTCCTGGAGAGAGTCAATAATCTCAAAGGCAAGGAATTCATAGCTGTAGAACGGCCAGTAGATGCATTTACAaacattctcttttcttccgGAACGACAGGTGATCCAAAGGCAATTCCATGGACCACTGTAACTCCTCTAAAAGCTGCTGCAGACGCATGGTGCCACTTCTCCATTGGTAAAGATGATGTAGTTGCCTGGCCCACTAATCTTGGATGGATGATGGGGCCTTGGCTAGTGTATGCTTCTTTGTTAAATGGAGCTCCAATGGCTTTATATGATGGATCCCCTCTTGGGCCTGGCTTTGCCAAGTTTGTACAGGATGCCAAAGTAACAATGCTTGGCGTGATCCCTAGTCTTGTTAGGAGTTGGAAAAGCATCAATTCCACAGTTGGTTATGATTGGTCTGCTATCCATTGCTTTGGTTCCACTGGAGAAGCATCTAGTGTAGATGAATACCTTTGGCTGATGGGAAGAGCTCTCTACAAACCCGTCATCGAATACTGTGGTGGTACTGAGATAGGGGGTGGATTTATCTGTGGATCATTACTACAAGCTCAGTCATTAGCTGCTTTCAGCACACCTGCCATGGGCTGTAGTTTGTTTATTCTGGGTGATGATGGTTATCCTATTCCAGAAAATGTTCCTGGAATGGGTGAATTGGCTCTTGGACCCCTCATGTTTGGGTCTTCTACTACACTGCTGAATGCTGATCATTACAGTGTCTACTTTAAGGGAATGCCCATGTGGAATGGAAAGGTTTTACGGAGGCATGGGGATGTATTCGAGCGTACTTCTAGAGGATTCTATCACGCGCATGGTCGTGCAGATGATACAATGAACCTCGGAGGGATCAAGGTGAGTTCTGTTGAGATTGAACGCATCTGCAATGGAGTAGATAGCAATATCCTAGAAACAGCTGCAATAGGTGTGCCACCCCCCGGAGGAGGACCTGAGCAGCTAGTAGTAGCTGTTGTATTCAAGAATTCAAACGGCAGAGACTTAAATCAACTGAGGATTTCTTTCAATTCAGCTCTCCAGAAGACATTAAATCCATTGTTTAGGGTTTCTCTTGTTGTGCCACTGTCATCTCTTCCTAGGACGGCATCAAATAAAGTTATGAGAAGGGTTTTGCGGAAGCAATTAGCTGAAAGTAACCAAAGTTCCAAGCTGTA 2174 0.4453 MAYKSLGSITLFDIESLGIAAQDAARLHATLTEIIRIHGAGTPETWHHITKRVLNPQLPFSFHQMLYYGCYKDYGPDPPAWLPDPKNAVLTNVGQLLERRGKEFLGSAYKDPITSFSDFQKFSVSNPEEYWTTVLDEMDVSFSKQPECILQENLPGGSHLSNPCGQWLPGAFLNPAKNCLNLNGKRRLNDPMIIWRDEVHNDLPVHRMTLKELRQEVWLVAYALQALGLEEGSAIAIDMPMNVTSVVIYLAIVLAGYVVVSIADSFAAREISTRLKISKAKVIFTQDLIIRGDKRLPLYSRVVDAQSPMAVVIPSQGSGFSMKLRSGDLSWHDFLERVNNLKGKEFIAVERPVDAFTNILFSSGTTGDPKAIPWTTVTPLKAAADAWCHFSIGKDDVVAWPTNLGWMMGPWLVYASLLNGAPMALYDGSPLGPGFAKFVQDAKVTMLGVIPSLVRSWKSINSTVGYDWSAIHCFGSTGEASSVDEYLWLMGRALYKPVIEYCGGTEIGGGFICGSLLQAQSLAAFSTPAMGCSLFILGDDGYPIPENVPGMGELALGPLMFGSSTTLLNADHYSVYFKGMPMWNGKVLRRHGDVFERTSRGFYHAHGRADDTMNLGGIKVSSVEIERICNGVDSNILETAAIGVPPPGGGPEQLVVAVVFKNSNGRDLNQLRISFNSALQKTLNPLFRVSLVVPLSSLPRTASNKVMRRVLRKQLAESNQSSKL 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00608 724 Gene3D - 611 724 IPR045851 -
Bva05g00608 724 Pfam AMP-binding enzyme 204 615 IPR000873 -
Bva05g00608 724 SUPERFAMILY Acetyl-CoA synthetase-like 118 717 - -
Bva05g00608 724 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 3 724 - -
Bva05g00608 724 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 3 724 - -
Bva05g00608 724 ProSitePatterns Putative AMP-binding domain signature. 359 370 IPR020845 -
Bva05g00608 724 Gene3D - 102 610 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00608 Bva-Chr5 3008527 3013722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00608 1 603 Acyl Lipid Metabolism Gene Families AT5G23050 67.881 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00608 - - gmx:100779628 1199.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00608 05 3008527 3013722 Bva05g00608 05 3008527 3013722 ECH