Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00589 ATGTGCAGAACGGAGAGGAGTGAGAAGAAGTGCGAAGATTTTGGAGAGAAGAGAGACAAACATTTCTATAGGCTGATGGGTTTGAAGACATTAGGAGAGAGTAAGGTTGAGAAGCTTAAAAATTCCATGGCTGCGTCCTCAAGGTCGAGAATGAAGCTCTGGATGATACGTGCCACAACGTCGGTTTTGCTTTGGACGTGCATCGTCCAGTTAACGGCGTTGGGTGATATGTGGGGGCCTAGAGTTTTGAAAGGGTGGCCTTCTTGTTTTACTCACGAGTCTGCTGCCAGGGCAATTGATATTGAGTTGCCTTCTGCACGTCCCAGAGTTCTCCCACCCAAGAGAGTTTATAAGAATAATGGTTACCTGATGGTTTCGTGCAATGGAGGACTGAACCAAATGAGAGCGGCGATTTGTGACATGGTAGTCATTGCAAGATATTTAAATGTCACGCTTATAGTCCCTGAGCTGGATAAAACTTCCTTCTGGGCTGATCCCAGtGAGTTCCAGGACATATTTGATGTAGATCATTTTATTACATCCTTGAGAGACGAGGTGCGGATATTGAAAGAATTGCCTCCTAGGCTCAAGCGAAGAATGGAAAATGGAACGCTTTACAGTATGCCACCAATTAGTTGGTCCGACATTTCTTACTACAAAAACCAGATTCTTCCTTTGATAAAAAAGTACAAGGTTGTGCATCTAAATCGAACTGACGCTCGACTAGCTAATAATGGCCAACCTTTAGAGATTCAGAAGCTGCGCTGCCGAGTTAATTTTAGTGCTCTGAGATTTACTCCACAGATAGAAGAGTTGGGCAGAAAGGTTATCCAGCTTCTAAGGGAAAACGGTCCATTTTTGGTACTTCATCTAAGGTATGAGATGGACATGTTGGCATTTTCAGGATGTACTCAAGGTTGCAATGGGGAGGAGGTGGAAGAATTGACTAGAATGAGATATGCATATCCATggtggaaagaaaaagtaattaattctgagttgaaaagaaaagatgggCTCTGTCCTTTAACACCTGAGGAGACTACCCTTACACTCAGTGCTCTTGGCATTGATCGAAGCATCCAGATCTACATTGCAGCTGGGGAAATATATGGTGGGGAAAGGAGGATGGCTGCTCTTGCAAAGGAGTATCCTAAATTGGTCAGGAAGGAGACTTTGCTAGAGCCATCTGATCTAAGGTTCTTCCAAAACCATTCATCTCAGATGGCAGCATTGGATTATCTTGTATCATTGGAGAGTGATATATTTGTCCCCACGTATGATGGAAATATGGCCAAGGTAGTTGAAGGGCACCGCAGATATCTTGGGTTTAGGAAGACGATTTTATTGAACAGAAAACTGCTAGTGGAATTGATAGATGAGTACAATAAAGGAGTACTGAACTGGGATGAATTCTCATCAGCGGTGAAGGAGGCTCACTCCAATCGTATGGGTCAACCAACTAAAAGATTGGTAATCCAGGACCGACCTAAAGAAGAAGATTATTTCTATGCCAACCCAGAGGAGTGCTTAGAACCTTTAGATGAACGAACCATTGAGTA 1562 0.4225 MCRTERSEKKCEDFGEKRDKHFYRLMGLKTLGESKVEKLKNSMAASSRSRMKLWMIRATTSVLLWTCIVQLTALGDMWGPRVLKGWPSCFTHESAARAIDIELPSARPRVLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVVIARYLNVTLIVPELDKTSFWADPSEFQDIFDVDHFITSLRDEVRILKELPPRLKRRMENGTLYSMPPISWSDISYYKNQILPLIKKYKVVHLNRTDARLANNGQPLEIQKLRCRVNFSALRFTPQIEELGRKVIQLLRENGPFLVLHLRYEMDMLAFSGCTQGCNGEEVEELTRMRYAYPWWKEKVINSELKRKDGLCPLTPEETTLTLSALGIDRSIQIYIAAGEIYGGERRMAALAKEYPKLVRKETLLEPSDLRFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYLGFRKTILLNRKLLVELIDEYNKGVLNWDEFSSAVKEAHSNRMGQPTKRLVIQDRPKEEDYFYANPEECLEPLDERTIE 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00589 520 CDD O-FucT_plant 122 447 IPR024709 -
Bva05g00589 520 PIRSF UCP009360 17 508 IPR024709 -
Bva05g00589 520 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 32 516 - -
Bva05g00589 520 PANTHER OS02G0726500 PROTEIN-RELATED 32 516 - -
Bva05g00589 520 Pfam GDP-fucose protein O-fucosyltransferase 122 442 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00589 Bva-Chr5 2925911 2929791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00589 118 511 Miscellaneous Gene Families AT2G37980 50.505 2.90e-135 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00589 K23280 - gmx:100793244 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00589 05 2925911 2929791 Bva05g00589 05 2925911 2929791 ECH