Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00588 ATGGACTTTTGGAACAAAGCTCGAAGCTTTGCCGAGGAAACCGCGAAGCGTACTCAGGAACTAACAAAGGAGGCTGCGAGGCGATCCCAGGACCTCTCCTTTGGACCCTCCAAATTGTCAGATATTATAGAGGAGACAACCAAGCGGTCCAAGGAATTTGCAGCTCAAGCTTCGAAGGGAGCCGACCACATAAGAATCGAAGCCATCAAGCGAGCGGACCAAATCAAACACTTAGCTGACGGGATCAGTCCTCCTGTTGGGATTGCGCCCACGGAACCTTCTGCGGTCATTCAAGACGATGAACTGGAGAGGTTTGGTATCACCCAAGAGTTGAGAGAGTTCGTAAGAGAGATCAATATGACCACGTTTCGAGATTTCCCTCTTCAAGATGATACATTATTGTGTGATGTTCCTGCGGTTTCAAATGTTAGGCAGGATCTAACCGAGTGGCAGGCAAGACATGCCAACCTCGTTCTTTCTTCGGTCAAGGAAATTTCGAACTTGAGGTATGAGCTGTGTCCCCGTGTCATGAAAGAGAGGAAATTCTggagaatatattttatacttgTGAATAGCCACATTGCACCCTACGAGAAGCGATATATGGAGGATGCTAAACTAATCTCAACTGAACAAGAGAATGCTAAACTAAACCCAACTGAACAAGACAAAGATAACAAAGCAGTGGAGTCACCAAAAGTAGAATTGACCTCTAATCAAGAAGAGCAGGAAGTTAAAAAGGAGAACAAGACTTCAACTTCATCAACTGAGCAAGATTTGGATGTGTTTCTTTTAGGAGATACAGGGGATAGTGACGATGACCCAGATGATCAGAATGTGGGGTTTGATGATGATTTGGACAAACTGGTGGATAGCTCGGATGAGGAGAAAGGAAAATCATA 902 0.4424 MDFWNKARSFAEETAKRTQELTKEAARRSQDLSFGPSKLSDIIEETTKRSKEFAAQASKGADHIRIEAIKRADQIKHLADGISPPVGIAPTEPSAVIQDDELERFGITQELREFVREINMTTFRDFPLQDDTLLCDVPAVSNVRQDLTEWQARHANLVLSSVKEISNLRYELCPRVMKERKFWRIYFILVNSHIAPYEKRYMEDAKLISTEQENAKLNPTEQDKDNKAVESPKVELTSNQEEQEVKKENKTSTSSTEQDLDVFLLGDTGDSDDDPDDQNVGFDDDLDKLVDSSDEEKGKS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00588 300 PANTHER BSD DOMAIN PROTEIN 1 296 - -
Bva05g00588 300 Gene3D BSD domain 108 205 IPR035925 -
Bva05g00588 300 Pfam BSD domain 149 194 IPR005607 -
Bva05g00588 300 MobiDBLite consensus disorder prediction 212 300 - -
Bva05g00588 300 MobiDBLite consensus disorder prediction 217 254 - -
Bva05g00588 300 ProSiteProfiles BSD domain profile. 142 194 IPR005607 -
Bva05g00588 300 MobiDBLite consensus disorder prediction 282 300 - -
Bva05g00588 300 SUPERFAMILY BSD domain-like 106 200 IPR035925 -
Bva05g00588 300 MobiDBLite consensus disorder prediction 1 32 - -
Bva05g00588 300 SMART wurzfinal6 142 194 IPR005607 -
Bva05g00588 300 MobiDBLite consensus disorder prediction 1 27 - -
Bva05g00588 300 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 296 - -
Bva05g00588 300 MobiDBLite consensus disorder prediction 266 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00588 Bva-Chr5 2918642 2922389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00588 2 275 EF-hand Containing Proteins AT1G69030 45.302 3.96e-75 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00588 - - qsu:112037308 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00588 05 2918642 2922389 Bva05g00588 05 2918642 2922389 ECH