Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00587 ATGCTAGTTGTAGATATGAATTCCAAAAGACAAAGGCGGCCAAATGTTAGGTTAGGGGAAATAGGAGATCTTTCTGCTGCTTTTGCTTGTGGGTTTCCTGAGAGAACACAAGAAAAGTTGGGGCCTAAAAGATGGAAACATGATGGTATAAATTCTAAGCAAATTGAACCCGACCAGATCAATGGGTTTTCTGAAGAAAGGTATTCTCAGCTCGCTGATTCAGATCCCGCGGTGTCTCCTGGGTGTTCAGCTGATTTTCAACAGAACAGAGAGAATAATAACCCAAACTCATCAAAATCAGCGATTGATGTTGTGAAATCCAATCAATTGAATGTGACCAAGTCTAAATTGGATTTCGGCAATATAACTCGGAAGTGTAGGGTCATGAAACGACGAGGTCGCAGCTCAATAAATGATGGTGGTTTCTTTTGTGGTGGTTGGAATTCTAGACTTAGCCCTGGATTGAGTTGTGAAGAAGGGAGAGTTAGTGCTGGGAAGGAGTTTGCGCGCTCCACTTCAGTTAAATCCAATGACCAGTCAATGGATTATGGTTTTAAGGACTTCTCAGATCGTAAAACACCATCAACCGGCAAAGAGGCATCTGAATATGATGTTTATGAATCCACCTGGCAACAAGCTAGTTCCCAGGATACTTGTGGTGAAGGTGAAGACAACAATGCATCTCCTGTTCCATGGGATGAAATCAGATGTATAGGCAATGCTGTTGGTGGTGTTGAAAGATGGTTGGAGGAGCTGGGATTTGGTAAGTATGCTGATTTGTTCGAGATGCATGAAGTGGATGAGGAAGTACTGCCGCTACTCACACTAGAAGATCTCAAAGAGATGGGTGTGTTTGCTGTTGGCCCACGACGCAAGTTGTACACCGCAATTCGACAGTTAAGAATGGGAAACACATA 917 0.4318 MLVVDMNSKRQRRPNVRLGEIGDLSAAFACGFPERTQEKLGPKRWKHDGINSKQIEPDQINGFSEERYSQLADSDPAVSPGCSADFQQNRENNNPNSSKSAIDVVKSNQLNVTKSKLDFGNITRKCRVMKRRGRSSINDGGFFCGGWNSRLSPGLSCEEGRVSAGKEFARSTSVKSNDQSMDYGFKDFSDRKTPSTGKEASEYDVYESTWQQASSQDTCGEGEDNNASPVPWDEIRCIGNAVGGVERWLEELGFGKYADLFEMHEVDEEVLPLLTLEDLKEMGVFAVGPRRKLYTAIRQLRMGNT 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00587 305 MobiDBLite consensus disorder prediction 38 53 - -
Bva05g00587 305 SUPERFAMILY SAM/Pointed domain 243 302 IPR013761 -
Bva05g00587 305 MobiDBLite consensus disorder prediction 81 100 - -
Bva05g00587 305 CDD SAM_superfamily 245 298 - -
Bva05g00587 305 Gene3D - 245 302 IPR013761 -
Bva05g00587 305 SMART SAM_4 237 303 IPR001660 GO:0005515
Bva05g00587 305 ProSiteProfiles SAM domain profile. 245 303 IPR001660 GO:0005515
Bva05g00587 305 PANTHER STERILE ALPHA MOTIF/POINTED DOMAIN-CONTAINING PROTEIN-RELATED 1 304 - -
Bva05g00587 305 Pfam SAM domain (Sterile alpha motif) 243 301 IPR001660 GO:0005515
Bva05g00587 305 MobiDBLite consensus disorder prediction 38 100 - -
Bva05g00587 305 PANTHER SCP160 1 304 - -
Bva05g00587 305 MobiDBLite consensus disorder prediction 54 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00587 Bva-Chr5 2915858 2917553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00587 240 297 Glycosyltransferase AT3G07170 39.655 9.28e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00587 - - qlo:115963773 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00587 05 2915858 2917553 Bva05g00587 05 2915858 2917553 ECH