Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00580 ATGGGAAGAGCACTGGCGAGGTTACCCTGTTTGTGGTTTGGTCCAGCTGCTATGTCTCGGGTTCGAATCAATTCTTCTGTGTCTTCTGCTTCCAAGTCCTTCTCTAATTCTGCCAAACACGTAAATGGAAGCGAGTTTTCAAGCAATGAAAGGTATGATTTTGGCAGTGGCGAGGCTGATAATGAGACTCAAATTGGAAATAAGATAATGGTGGTTGTGGATTCTAGCCTTGAAGCTAAGGGGGCTCTAGATTGGGCGCTCTCACACACTGTCCAGAGCCAGGATACTATAGTTCTTGTTCATGTAGCCAAGCCCTCAAGACAAGAGTCCTCTGGGGGGAAACTTCATCTAAAGGCTTATCAACTTCTTCTCAATATGAAAAACATTTGCCAAACAAAGAGACCAGGGGTTCAAGTGCAGTTTGTGATactagaaggaaaagaaaagggaaaaagcaTAGTGGAAGAGGCAAAGCAACAGAAGGTGTCGCTATTGGTTACAGGGCAAAGAAAGCGGTCCATGTTGTGGTGCTTAATGAAGAGATGGGGACGAAAGAGAGCAAGAACAGGGTTTGTTGAGTACTGTATACAGAATTCGGCATGCATGACCATTGCGGTGAGGAGGAAGAGCAGTAAACTTGGAGGCTATTTGATCACTACTAAGcgacataaaaaattttggctTTTGGCTTA 692 0.4191 MGRALARLPCLWFGPAAMSRVRINSSVSSASKSFSNSAKHVNGSEFSSNERYDFGSGEADNETQIGNKIMVVVDSSLEAKGALDWALSHTVQSQDTIVLVHVAKPSRQESSGGKLHLKAYQLLLNMKNICQTKRPGVQVQFVILEGKEKGKSIVEEAKQQKVSLLVTGQRKRSMLWCLMKRWGRKRARTGFVEYCIQNSACMTIAVRRKSSKLGGYLITTKRHKKFWLLA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00580 230 Pfam Universal stress protein family 68 207 IPR006016 -
Bva05g00580 230 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 230 - -
Bva05g00580 230 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 67 209 - -
Bva05g00580 230 Gene3D HUPs 66 213 IPR014729 -
Bva05g00580 230 CDD USP_Like 68 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00580 Bva-Chr5 2888718 2889805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00580 69 175 Receptor kinase-like Gene Family AT5G35380 28.571 3.44e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00580 - - gmx:100527308 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01122 06 8931128 8931454 Bva05g00580 05 2888718 2889805 ECH
Bva05g00580 05 2888718 2889805 Bva05g00580 05 2888718 2889805 ECH