Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00566 ATGAGGTGGGAAAAGGTTGTAAATCCCGTACAGGGTCAAGCAGTAGCTCAACATGGTATGGTTGAGCTATCTGGGCCAGGCAAGAGGTGGGGACATTCCTGCAACGCCATTAAAGGTGGGAGACTTCTCTATGTCTTCGGAGGTTACGGCAAAGATAACTGCCAGACAAACCAAGTGCACGTCTTTGACACTGTCAAACAGACTTGGATCCTACCCGTGATAAAAGGCACTCCTCCAACTCCTAGGGACAGCCATAGCTGCACGACTGTTGGTGATAATCTATTTGTGTTTGGGGGTACAGATGGGATGAACCCACTCAAAGACTTGCACATACTAGACACTTCTACACACACATGGATTTCTCCTACTATAAGAGGAGAAGGACCAGAGGCACGGGAGGGTCATAGTGCAGCTCTTGTTGGTAAACGGCTATTCGTATTTGGTGGTTGTGGAAAGTCTGcagataataataatgaggTTTACTACAATGATCTTTACATATTGAATACAGAGACTTTTGTTTGGAAGTGTGCGGCTACATCTGGCACTCCCCCGTCTCCTCGTGATAGCCATACTTGTTCCTCTTGGAAAAACAAAGTTATTGTGATAGGTGGTGAAGATGGACATGATTATTATTTGTCTGATGTTCATATCCTTGATACAGATACTCTAATTTGGAGGGAGCTGAATGTATCTGGCCAGTTGTTGCCACCTCGAGCTGGTCATTCTACAGTTTCTTTTGGCAGGAACTTGTTTGTTTTCGGAGGCTTTACAGATGCCCAAAATTTATACAACGACCTTTATATGCTTGATGTTGATACTGGTATTTGGACTAAGGTGGCAACTGCAGGCGATGGACCTTCTGCTAGATTTTCTGTTGCCGGTGACTGTTTAGACCCGTTTAAGGGTGgtgttcttgttttcttcgGTGGTTGTAATAAAAGTCTTGAGGCCCTGGATGATATGTTTTACCTTTATACAGgTCTTGCTCGGGAAACTGAACAGAGGCCAGAAAAGTTATCTTTAAGGAAGCAATTGAAGCTGAAATGCCAAGAACAAAATCTCAATACTGTACAAAACCGAGGTCTGTTTAGATATGGAGTGGGTGCTGATGTTAGTCAGCCCATGACAGTGTTGGGTTATAGCCAGCCAAGTAGACAAAATATCCCAGTGCATCAATTCATGCCTCCTGGAAAGAAATCATTTCAAGCGAAGGTTACTGAAAGCATATCAGAAGGATATAGTATTGAAACTGTTATTGATGGAAAGCCTCTTCGTGGAATTCTGTTTTTAAACAAGTCAAACTTTCTGCTCCCAGCTACCCTTACTTCCAGTAGGAAAAGGATTGCTGCTGAAACTGGTACTGTTATCCTGAATGCCATGCATcccaacaaattaaagaattctAAAGCACTTAAACATGATGAAATAGAAGACAGACAGATAAATGGTGTTCAGAGAGACAGTTCAGTATGTAACGAGAACCTTACAGAAGCTTTTGCCACACTACTATCAAGCAACCCTACTTCTGATGCTTCCAAGCCCCTTAAGGTTTCTGTCAACAAAGAACCAGaagctttttctttgaatCAGGATGatgacaagaaaaatgacaTACCAAAATCCTTAGGGGAAGACTCAAGAAATGATGTGTTAAGTTCCATAGTTGATGTTTCAAGTATTGATAAAGCAACTGACATGCCAAGTTCCCAAACTGATGTCCCAACTGatgataaaacaattaatgtgCCACGTTCCAAAACCGATGTCCCTACTGATGGCAAAACATATGATGTTCCAAGTTCTAGTGCCGGTATCCCTATGGATGATAAAACAAATGGTGCACCAATTTCCGAAACTGATGTCCCAACTGATGTTGTTGTGCCAAGTTCTGATGTTAGTGTCGCTACTGATGATAGAACAAATGATGCACCAgcttttgataaaaatgtGCCAACTGGTAATAGAACAAATGGTGCGCTAGTTTCCAATTCTGAAGTCCCAAGACATGGTCAAACAAGTGATGAACCAATCTGCAACACTGAAGTTCTGAAACCTGCTGCATTTGAGAGTGTTCTGTCTCTGTCAAATCAAGGCTGCACAGGTCCAAGGACCGAAGAAAACAATGAACCAGTGGAATG 2141 0.405 MRWEKVVNPVQGQAVAQHGMVELSGPGKRWGHSCNAIKGGRLLYVFGGYGKDNCQTNQVHVFDTVKQTWILPVIKGTPPTPRDSHSCTTVGDNLFVFGGTDGMNPLKDLHILDTSTHTWISPTIRGEGPEAREGHSAALVGKRLFVFGGCGKSADNNNEVYYNDLYILNTETFVWKCAATSGTPPSPRDSHTCSSWKNKVIVIGGEDGHDYYLSDVHILDTDTLIWRELNVSGQLLPPRAGHSTVSFGRNLFVFGGFTDAQNLYNDLYMLDVDTGIWTKVATAGDGPSARFSVAGDCLDPFKGGVLVFFGGCNKSLEALDDMFYLYTGLARETEQRPEKLSLRKQLKLKCQEQNLNTVQNRGLFRYGVGADVSQPMTVLGYSQPSRQNIPVHQFMPPGKKSFQAKVTESISEGYSIETVIDGKPLRGILFLNKSNFLLPATLTSSRKRIAAETGTVILNAMHPNKLKNSKALKHDEIEDRQINGVQRDSSVCNENLTEAFATLLSSNPTSDASKPLKVSVNKEPEAFSLNQDDDKKNDIPKSLGEDSRNDVLSSIVDVSSIDKATDMPSSQTDVPTDDKTINVPRSKTDVPTDGKTYDVPSSSAGIPMDDKTNGAPISETDVPTDVVVPSSDVSVATDDRTNDAPAFDKNVPTGNRTNGALVSNSEVPRHGQTSDEPICNTEVLKPAAFESVLSLSNQGCTGPRTEENNEPVE 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00566 713 MobiDBLite consensus disorder prediction 506 677 - -
Bva05g00566 713 PANTHER KELCH REPEAT DOMAIN 1 538 - -
Bva05g00566 713 MobiDBLite consensus disorder prediction 651 677 - -
Bva05g00566 713 MobiDBLite consensus disorder prediction 624 638 - -
Bva05g00566 713 Gene3D - 154 389 IPR015915 GO:0005515
Bva05g00566 713 Gene3D - 2 153 IPR015915 GO:0005515
Bva05g00566 713 SMART kelc_smart 199 249 IPR006652 GO:0005515
Bva05g00566 713 SMART kelc_smart 42 92 IPR006652 GO:0005515
Bva05g00566 713 SMART kelc_smart 93 142 IPR006652 GO:0005515
Bva05g00566 713 SMART kelc_smart 250 300 IPR006652 GO:0005515
Bva05g00566 713 MobiDBLite consensus disorder prediction 547 599 - -
Bva05g00566 713 Pfam Galactose oxidase, central domain 29 69 - -
Bva05g00566 713 Pfam Galactose oxidase, central domain 238 287 - -
Bva05g00566 713 Pfam Galactose oxidase, central domain 187 234 - -
Bva05g00566 713 Pfam Kelch motif 81 119 IPR006652 GO:0005515
Bva05g00566 713 MobiDBLite consensus disorder prediction 527 545 - -
Bva05g00566 713 Pfam Kelch motif 129 173 - -
Bva05g00566 713 SUPERFAMILY Kelch motif 76 326 IPR015915 GO:0005515
Bva05g00566 713 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 1 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00566 Bva-Chr5 2808183 2814145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00566 56 315 Acyl Lipid Metabolism Gene Families AT3G05420 29.151 1.20e-29 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00566 - - gmx:100820222 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00566 05 2808183 2814145 Bva05g00566 05 2808183 2814145 ECH