Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00565 ATGACCGGTACTACTAAGGATTCTGCACTGATGAGTTCGCTTGTGGCTTGTGATGATGTTAGTGGGGTTGGACTTAAAGAAAGTAAAGCAGTAAAGCATTCTTTTATCGAGCTGCCCATGATAAATGGTTCGGAAGGTTCTCTGAAAAATGCAGAAACAGTAAATTcatcaaagaaatcaaaaagtagaaataaaCGGAAGAGAGCAGATAAAGAAGCTAAGGATGAAGGTGCTAATTATTCACTGGATAATTCTTCTATGAAGACTCGTGCATCTGTAAAAGACTTGTGTAATGAGTCTTCAGCTGTGCATAATTTGGTAAGTTCCCAGATAAGTGCAGAAGTAAGCTCCacaagtaaaaggaaaaataagaaaaagaagaagacaatACATGGTTCTATTGATAGCAATGTCAATGATTCTTGTGTTTCTGAAGATAACTTTTCTATTGAGACTTCCACGCCTGCGTTGAATATACCTCGTCAAGTTCAAGACGTATCAGTGGATCCAGTAATGGGACAATCTTGTGAgggaagaaaatttgatgaagCAGAATATGCGGGGAAGGAACCAAACGTGCTTGAAAAGGCTGCAGAAACCAGCAAAGCAGAGCATGACCTTCAGGAAGTAAGCAGCAAGCAGAACTCAGTTGTAGCAAAAGCTGAGAATTTTATGAAAGAGTCTGTCTTAGAAGttgtaaaattaaacacagcgcaatgtataaattataactctTCCAAGCCTGGAGACAATGATGGTTATATAAAGAATGCAAGTCTAGTGAAGAAACTTGATGATTATTCATTAGTTCATGGTGCTTCACAAAAATGTCAGAACTTTAAAACCTATACGAGGAGAAAAGGAGTTAAAACTAGTTTCAGGATAGATGGTAATCACCCTGGCCCTGTGCATTATAACGAGGAACAAATTATAGAGGATCATAACAAAGAtgattcacaaaaaaatttggatgaaCCATTGGCAGCGGAATCAATGTATAAGTTGGAAACAAAACTTTCAAGGGACAAAGTTACAGCAAATGGTGAAGCCTCATCTGATGAATTGAAGCCGATGAGAGGGAACATGTGTGACCAAGGATTTATGACTGATGTATCTGTAGTGGACATTCCCGAGGTGCAACTTGCTGAGAAAATTGTTGGAAAACTGGATGGTATTGAGGTTACAGGACATGATATGTCTTCTGCAGGTAGCATTGCTGATTTAAGCTTAATCAGTAAGGAAGATGATCCTTCAAGGATATCACACTTTTCACTAGATAGAACTCTTACAAGCCTCTCAAAGAAGAAGCTTCTTGTCCTCGATCTGAATGGACTACTTGCTGACTTTGTCGAATGGCCTGCTAGAGGGTATAAAGCAGACATGAGGCTTTCTAAGAAATCAGTTTTCAAGAGACCTTTTTGTGATGATTTTTTGCAGTTCTGCTTTGATAAATTTCATGTGGGTGTGTGGTCATCAAGACacagGGTTAATGTTTATAGAGCAGTCAAATTTCTTATGGGAAAGCTCGAATCCAAACTGCTCTTTTGTTGGCATCAATACCACTGTACCACAACAAAATTCAGTACTGTCGAGGACAAAAAAAAGCCCCTTGTGTTGAAGGAGCTTCGAAAGTTGTGGGTAAAGCTCGAACCTGGTCTTCCGTGGGAGAAGGGAGACTTTAATGAGTCAAACACTTTATTGTTGGATGATTCCCCATATAAGGCACTACGAAATCCAGCGAATACAGCTATATTTCCTTATTCTTACCAGTACACTGACACTAACGATGCATCCCTAGGACCTGGAGGTGATCTTCGGGTTTACCTTGAAGGGCTGGCTTTGGCTGAGAATGTTCAAGAGTATGTGGCTTCGAATCCATTTGGGCAACGGGCCATAAGAGAATCCAATCCATCTTGGCGTTACTATCTTAAAGTTATTGAGGGGATAAATACTGCAAATGAAGCTAGAACCTCTCCTCCATGCAGTGAGTGTTGTACTACAGAGAACATAGGATA 2015 0.3757 MTGTTKDSALMSSLVACDDVSGVGLKESKAVKHSFIELPMINGSEGSLKNAETVNSSKKSKSRNKRKRADKEAKDEGANYSLDNSSMKTRASVKDLCNESSAVHNLVSSQISAEVSSTSKRKNKKKKKTIHGSIDSNVNDSCVSEDNFSIETSTPALNIPRQVQDVSVDPVMGQSCEGRKFDEAEYAGKEPNVLEKAAETSKAEHDLQEVSSKQNSVVAKAENFMKESVLEVVKLNTAQCINYNSSKPGDNDGYIKNASLVKKLDDYSLVHGASQKCQNFKTYTRRKGVKTSFRIDGNHPGPVHYNEEQIIEDHNKDDSQKNLDEPLAAESMYKLETKLSRDKVTANGEASSDELKPMRGNMCDQGFMTDVSVVDIPEVQLAEKIVGKLDGIEVTGHDMSSAGSIADLSLISKEDDPSRISHFSLDRTLTSLSKKKLLVLDLNGLLADFVEWPARGYKADMRLSKKSVFKRPFCDDFLQFCFDKFHVGVWSSRHRVNVYRAVKFLMGKLESKLLFCWHQYHCTTTKFSTVEDKKKPLVLKELRKLWVKLEPGLPWEKGDFNESNTLLLDDSPYKALRNPANTAIFPYSYQYTDTNDASLGPGGDLRVYLEGLALAENVQEYVASNPFGQRAIRESNPSWRYYLKVIEGINTANEARTSPPCSECCTTENIG 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00565 671 Pfam NLI interacting factor-like phosphatase 436 618 IPR004274 -
Bva05g00565 671 Gene3D - 405 627 IPR023214 -
Bva05g00565 671 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 21 654 - -
Bva05g00565 671 ProSiteProfiles FCP1 homology domain profile. 431 612 IPR004274 -
Bva05g00565 671 SMART forpap2 434 594 IPR004274 -
Bva05g00565 671 MobiDBLite consensus disorder prediction 79 95 - -
Bva05g00565 671 MobiDBLite consensus disorder prediction 41 95 - -
Bva05g00565 671 SUPERFAMILY HAD-like 432 621 IPR036412 -
Bva05g00565 671 MobiDBLite consensus disorder prediction 108 132 - -
Bva05g00565 671 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 21 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00565 Bva-Chr5 2802183 2806662 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00565 - - aprc:113864558 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00565 05 2802183 2806662 Bva05g00565 05 2802183 2806662 ECH