Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00558 ATGGCTTCCTCGGCCGCGCCTTTTATTTTAAACTTCACAGGTTTTGCTGCTTTTGTATTTCTGTTTCTCATTGTTGGGTGCACTGCAAGGCCTTTCTATCCACTCCCTAGTAAAAATAATGCTGATGGAAGCAGACAACCGTTGCAAACTTTTCGCCCATTTAACATTGCACATCGAGGGTCAAATGGAGAGCTTCCTGAAGAAACTGCTCCTGCTTACATGCGAGCAATTGAAGAGGGAGCAGACTTCATTGAAACTGATATCTTATCTTCCAAAGATGGTGTTCTTATATGCTTCCATGATGTAACACTTGATGATACCACtgatattttaaatcacaAAGAGTTTGCAAATCGTAAAAGGACCTACGAAGTCCAAGGGGTCAACACTACTGGCTTTTTCATTGTTGATTTCAccttaaaggaattgaagtCATTGAGAGTGAAGCAACGGTATAGGTTCCGGGATCAACAATTTAATGgaaaatttcaaatcattaCTTTTGAAGAGTTCATTTCGATTGCATTGGACGCATCCAGAGTTGTTGGAATATATCCAGAGATAAAGAATCCAGTTTTAATCAATCAGCATGTCAAATGGCCAGGTGGTAAGAGATTTGAGGACAAGTTTGTGGagacacttaaaaaatatggatACAAGGGTTCATATTTGTCAAAAGATTGGCTAAAACAACCTGCATTCGTTCAGTCATTTGCTCCGACTTCACTTGTGTATATATCAAATCAGACGGACTTGCCCaagattttcttaattgatgatattaatattCCAACACAAGACACAAATCAGTCATATTGGGAGATTACATCCGACAGTTACTTCGACTACATAAAGCAATATGTTGTAGGAATCGGACCTTGGAAGGATACAGTGGTTCCTGTTGTAAATAACTATTTGCAAACTCCTACTGATCTTGTTGCCAGGGCACATGCACATAACCTGCAGGTACATCCATACACTTACCGAAACGAGAACTTGTTTTTGCACTTCAACTTCAAACAAGACCCGTATGAGGAGTATGATTATTGGATCAACCAGATAGGAGTTGATGGTCTGTTCACAGACTTCACCGGTAGCCTTCATAAATTTCAGGAACGGACCTCAGCTAACCCTTCAAATCACCAGGACGACAGCAGTGCATCTAAGCTATTGCATAAAATTGCATTGTTGGTCTCCTCATATAAAGGGTA 1211 0.379 MASSAAPFILNFTGFAAFVFLFLIVGCTARPFYPLPSKNNADGSRQPLQTFRPFNIAHRGSNGELPEETAPAYMRAIEEGADFIETDILSSKDGVLICFHDVTLDDTTDILNHKEFANRKRTYEVQGVNTTGFFIVDFTLKELKSLRVKQRYRFRDQQFNGKFQIITFEEFISIALDASRVVGIYPEIKNPVLINQHVKWPGGKRFEDKFVETLKKYGYKGSYLSKDWLKQPAFVQSFAPTSLVYISNQTDLPKIFLIDDINIPTQDTNQSYWEITSDSYFDYIKQYVVGIGPWKDTVVPVVNNYLQTPTDLVARAHAHNLQVHPYTYRNENLFLHFNFKQDPYEEYDYWINQIGVDGLFTDFTGSLHKFQERTSANPSNHQDDSSASKLLHKIALLVSSYKG 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00558 403 SUPERFAMILY PLC-like phosphodiesterases 53 369 IPR017946 GO:0006629|GO:0008081
Bva05g00558 403 ProSiteProfiles GP-PDE domain profile. 53 371 IPR030395 GO:0006629|GO:0008081
Bva05g00558 403 Gene3D Phosphatidylinositol (PI) phosphodiesterase 51 370 IPR017946 GO:0006629|GO:0008081
Bva05g00558 403 PANTHER OS01G0763600 PROTEIN 17 402 - -
Bva05g00558 403 CDD GDPD_ScGlpQ1_like 53 364 - -
Bva05g00558 403 Pfam Glycerophosphoryl diester phosphodiesterase family 58 365 IPR030395 GO:0006629|GO:0008081
Bva05g00558 403 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 17 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00558 Bva-Chr5 2754250 2758727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00558 12 401 Acyl Lipid Metabolism Gene Families AT1G74210 72.379 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00558 K01126 - qsu:112017679 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00558 05 2754250 2758727 Bva05g00558 05 2754250 2758727 ECH