Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00550 ATGGCCAAATCGCTACCCTACACTCATCATACTCATGCCATGTTCGTGGACGTTTCAGAAAAACCAACAAACCCAGCCAATAATGATATGCACGCCACCATCGAGCTACGCATACACCAAAGACTCAAAACGCTTCTCTCATTTGTAGAGATTAATTTTCTGATGATAAGTTCCGGGATCAACCCCGTCTATGCTTATAATAGAAGATATCAGTCTAGTTTTCTTCATACGTCTACACTTCAGCTGAGGAATTGTTATTGTGGAATTCGAGTTGGCTTTATGAAAAAGCACACGTCATTCAAACTTGTTGCTGCTTCAGTTCAACCAGTTGGGGACTCAAAACTGGGCCAATTTGACAACACTCTTCCTTCCGAAGAGATTCTTGAGCTTTGGAGAAATGCTGATGCTGTGTGCTTTGATGTCGATAGCACTGTCTGCATCGATGAAGGTATTGATGAGCTAGCTGAGTTCTGCGGAGCTGGAAAAGCTGTGGCAGAGTGGACTGCAAGAGCAATGGGTGGTTCCGTTCCTTTTGAGGACGCATTGGCTGCTAGACTATCTTTGTTCAACCCCTCTTTATCCCAAGTTCAGAATTTTCTTGTGCGAAGACCCCCAATGTATGAGAGTCTGTCTCGACACTTGTCGGTATTCTTGTACATGTATTTGTTTAATGTCTTTGTATACGTGGACTACATAGCAGGTGTCATATGGATGCTGAGATCTACTATAGACTACCCAATTTTCTCTTCCTGTTTGAGGTGTCCATGCGAGTCTGAGACAGGGCTTTCCTCCGGCATCGAAGAGTTAATTGGGAAGCTAAAGGCTAatcaaattcaagtttatttGATCTCAGGGGGCTTCCGTCAAATGATCAATCCTGTTGCATCAATACTTGGGATTCCACACGAGAATATTTTTGCAAATCAATTGCTTTTTGGAAACTCTGGCGAGTTTCTAGGGTTTGATAAAAATGAGCCTACTTCAAGAAGTGGAGGAAAAGCTACTGCAGTGCAACAAATCAGGAAGGCTCGCCAATATAAATCATTGGTTATGGTTGGGGATGGTGCAACTGATCTTGAGGCTCGTAGGCCGGGAGGTGCTGACTTATTCATTTGCTATGCTGGTATTCAACTGCGAGAATCTGTTGCTGCAAATGCTGATTggttagtttttaattttaatgaccTCATCAATTCATTGGGTTA 1205 0.4199 MAKSLPYTHHTHAMFVDVSEKPTNPANNDMHATIELRIHQRLKTLLSFVEINFLMISSGINPVYAYNRRYQSSFLHTSTLQLRNCYCGIRVGFMKKHTSFKLVAASVQPVGDSKLGQFDNTLPSEEILELWRNADAVCFDVDSTVCIDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEDALAARLSLFNPSLSQVQNFLVRRPPMLSSGIEELIGKLKANQIQVYLISGGFRQMINPVASILGIPHENIFANQLLFGNSGEFLGFDKNEPTSRSGGKATAVQQIRKARQYKSLVMVGDGATDLEARRPGGADLFICYAGIQLRESVAANADWLVFNFNDLINSLG 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00550 346 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 136 307 - -
Bva05g00550 346 PANTHER PHOSPHOSERINE PHOSPHATASE 54 345 - -
Bva05g00550 346 Pfam haloacid dehalogenase-like hydrolase 135 308 - -
Bva05g00550 346 CDD HAD_PSP_eu 135 338 - -
Bva05g00550 346 Gene3D - 198 345 IPR023214 -
Bva05g00550 346 TIGRFAM serB: phosphoserine phosphatase SerB 129 330 IPR004469 GO:0006564|GO:0036424
Bva05g00550 346 Gene3D Phosphoserine phosphatase; domain 2 147 197 - -
Bva05g00550 346 SUPERFAMILY HAD-like 126 345 IPR036412 -
Bva05g00550 346 PANTHER BNAA06G12800D PROTEIN 54 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00550 Bva-Chr5 2718897 2724317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00550 K01079 - gmx:100789869 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00550 05 2718897 2724317 Bva05g00550 05 2718897 2724317 ECH