Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00546 ATGGAGGCGGTACTGCAGTCCGACGTCGACAGCTGCCGCACCAACGACTGCTGCGATGCCCGACGGCGGGTAGGTCTGCTATACGATGAGAGGATGTGTAAGCACAACACACCAGACGATGATTATCATCCCGAGAACCCCAACCGGATTAGGGCTATTTGGAAGAAGCTCCAAAGTGCTGGCATTCCTGACAGATGTGTGGTTTTGGAATCCAAAGAAGCTGAAGAGAAATATTTGCTTTCGGTGCATTCCAAAAATCATGTTAATCTGATAAAGAATATCAGCTCTAAACAATTTGATTCAAGGAGGCATAGGATTGCggcaaaatttaattctatatattttaatgaaggTTCGTCAGAAGCCGCTTATCTTGCTGCTGGGTCTGTTGTAGAGGCTGTTGAGAAAGTTGCAACTGGCGAATTGAATTCTGCTGTTGCCATTGTTAGGCCTCCAGGGCATCATGCAGAACAAAATGAAGCTATGGGTTTCTGTTTGTTCAACAATGTGGCAGTTGCAACAAGTTTTCTCTTAGATGAAAAACCAGAATTAGgtgtgaagaaaattttaattgttgattgGGACGTTCATCATGGAAATGGTACTCAAAAAATGTTCTGGAAGGATTCCCGTGTTTTGTTCTTCTCTGTTCACAGGCATGAGTTTGGGAGTTTTTACCCAGCTAATGATGATGGTTTCTATACCATGATTGGGGAAGGACCAGGTgctggatataatataaatgtgCCCTGGGAGAATGGGAGATGTGGTGATGCAGACTACTTTGCAGTGTGGGATCATATCTTGCTTCCTGTTACAAGGGAGTTTAATCCAGATATAATTCTAGTCTCCGCCGGATTTGATGCAGCTGTTGGTGATCCTCTGGGGGGATGTTGCGTCACACCTTATGGTTATTCAGTTATGTTGAAAAAGTTGATGAACTTTGCACAAGGTAGGATTGTACTGGTGTTAGAAGGAGGATATAATCTTGATTCCATAGCAAAGTCAATGCTTGCATGTGTGGAAGTTTTGCTAGGAGACAAGCCTGTTACTGGTTGCTCAGAGGCCTACCCATTTGAGTCTACTTGGCGTGTAATACAAGCGGTTCGCCAGGAATTGAGTCCCTTCTGGCCTACTCTTGCCAGTGTATTACCTGATAAATTAACTAGTCAGAAGGCACCACCTCCGCATACTCTGCTTTTCTCTGAATCTGAGACTGAGGATGACAAGGGTCCACAGGATTCTGAGAATCTTGAAGAGGTTCTTCAGGGTGTCATTGAACCCCTCTTGAAGCTGAAAATTGGCGCAGATAATCATGGTAGAGTCACTGCTGCTTCTAGTTCGTTGCGATCAGAAATGTCAAATATTTGGATCTGGTATGCCTCTTATGGATCAAATATGTGGAAATCAAGATTCCTGTGCTACATAGCCGGTGGAAAGGTGGAAGGTATGCATATGCAATGTTCTGGTTCAATGGATAGAACCCTGCCAAAGGAGATTCTTTGGAAGACTTTCCCTTGCCGTTTATTTTTTGGTCGCGATTCTACACATACTTGGGGCCCTGGAGGAGTTGCTTTCGTTAATCCTGAAAGAAATCTTCAGGAAAATACTTACATGTGCATGTATAGAATTTCGCTCGAGCAGTTCAATGATGTTTTGCTTCAGGGAAATGGTCTAAGCTACGATTTGGTTTCtcctttgtttaatttaactgCACTAGATGCTGCCACTGTTAAGGAGTTCAATTATCAAGAGGTTGTCAAGGGTGCGTGGTACGGTAATGTTGTATACTTGGGGAAGGAGCAAGATATTCCCATATTAACCATGACGTGTTCAGTTACTGATATTGAACGCTTCAAATCTGGAAAGCTACCCTTGCGTGCCCCCAATAAAGCTTATGCCGACACCTTAATAAAAGGTATGGTAGAAGGAGAACAGCTTACAGAGGCGGAGGCAACTGCTTATATTGAGGCTGCTGCCAAACCACTGTA 1991 0.4219 MEAVLQSDVDSCRTNDCCDARRRVGLLYDERMCKHNTPDDDYHPENPNRIRAIWKKLQSAGIPDRCVVLESKEAEEKYLLSVHSKNHVNLIKNISSKQFDSRRHRIAAKFNSIYFNEGSSEAAYLAAGSVVEAVEKVATGELNSAVAIVRPPGHHAEQNEAMGFCLFNNVAVATSFLLDEKPELGVKKILIVDWDVHHGNGTQKMFWKDSRVLFFSVHRHEFGSFYPANDDGFYTMIGEGPGAGYNINVPWENGRCGDADYFAVWDHILLPVTREFNPDIILVSAGFDAAVGDPLGGCCVTPYGYSVMLKKLMNFAQGRIVLVLEGGYNLDSIAKSMLACVEVLLGDKPVTGCSEAYPFESTWRVIQAVRQELSPFWPTLASVLPDKLTSQKAPPPHTLLFSESETEDDKGPQDSENLEEVLQGVIEPLLKLKIGADNHGRVTAASSSLRSEMSNIWIWYASYGSNMWKSRFLCYIAGGKVEGMHMQCSGSMDRTLPKEILWKTFPCRLFFGRDSTHTWGPGGVAFVNPERNLQENTYMCMYRISLEQFNDVLLQGNGLSYDLVSPLFNLTALDAATVKEFNYQEVVKGAWYGNVVYLGKEQDIPILTMTCSVTDIERFKSGKLPLRAPNKAYADTLIKGMVEGEQLTEAEATAYIEAAAKPL 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00546 663 PANTHER HISTONE DEACETYLASE 20 622 - -
Bva05g00546 663 PRINTS Histone deacetylase superfamily signature 151 174 IPR000286 -
Bva05g00546 663 PRINTS Histone deacetylase superfamily signature 278 288 IPR000286 -
Bva05g00546 663 SUPERFAMILY Arginase/deacetylase 22 377 IPR023696 -
Bva05g00546 663 PANTHER BNAA09G05590D PROTEIN 20 622 - -
Bva05g00546 663 Pfam Histone deacetylase domain 43 343 IPR023801 -
Bva05g00546 663 MobiDBLite consensus disorder prediction 389 416 - -
Bva05g00546 663 Gene3D - 446 661 - -
Bva05g00546 663 Gene3D Histone deacetylase domain 16 393 IPR037138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00546 Bva-Chr5 2695848 2702777 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00546 K11406 - gmx:100788831 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00546 05 2695848 2702777 Bva06g01220 06 9452414 9454403 BWGD
Bva05g00546 05 2695848 2702777 Bva05g00546 05 2695848 2702777 ECH