Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00545 ATGCTGCGACCAGGAGTTGCCCACAGAGTTGACCCTTGTGATATATGTGGCGCTGTTGGTTATCCTGAATTAATTATGACGTGCTGTAAATGCAAAATAGCTCGTGAACATGTTTACTGTATGCGAGTTTATCCCAAGGAGATTCAAGATTGGTTTTGTGAATTTTGCTTATCTAGGAATGAGACAATCTCACCAAAATATGGTGGAAACAAGAACCTCTCAAGCTCGCAAGCTTGTTTTAGAAGGAAAATTCCTGTTGCAACTGGGAAGGTGAAATTCATTCCCGAGGAGGAAGTCATTAAACTTTCACGAGGACAATTTGCACTAAAGTCTGGTCCAGCAAATTCTTTTACATGTCTAGCCCGGAAGACTTCTGTGGGATCCAAAAATGCCATCCCAAAGAATTCAACTCTGGCAGTAAAACCAAATCCTAGCATAAGACCTACAGATGGGAATATCCCTACAGACAATAGAGTAGAAAAGAGTTTGATGGCTAATCAACAGGCTCCTCACTCAATACATAAAGTGGTGTCTGCCTCAGAAAGAAAGGCTCCTAATACTCCTGCAAAGGAGTATGATTGCAGAGAACAGTCCCCACGTTTCGTTAGGCCTATCAACAAACCAGAAAGCTGTCTTCCAGTTGTCAGTTCTGgTGGTGCCTTTCATGATGTTGATGAATTTATTAGATCTAATGTTGAAGAAAGAGACCTTCAGAGTTTGTTGACAAAATTCAAGCTGTATCTCTCTTATTTACCTTCTTTAGATGTCTCCTGGAGAGGTGGATTCAAATTTAACTGCGCTGCCGCGTCTGGTGAATTTTATGGTGCCTTCCAAGCTCAACCTCCATGCACTATTCATCGTAAAGCATATAAGTCTTCACTTCAAATGCCCCCAATCCTTGAAGTGGAGCCAATTTGTACATCCCTTCTCCTCACAGATTTATTTCAGAATGATTGTCCTGATCTTCAAGATGTTGCGTTGTACTTCTTTCCTTCAGATAACACTGAGAGGTCTAGGCAGAGCTTAAATAGTGTATTTGAGCTGCTGAATGTCAACAACTCAACGTTGAAATGTGCTATCAACGGAGTGGAGTTGTTGATGTTTACCTCAAAACAGCTTGATGTGGACTCACAGGGCATTATTGCGAGAGTTACTGCAGAATATTTCCTGTGGGGAGTTTTTCGCCaagtaaaatatgataaaattgcCAAAAGATCTTCTGACATGGAGGTTGTTAGTATGGAAATTGACATGCTAGGAGGAATAGATGTTGGGATCACTGATCTTGTTATGCAAGATAAACCCAAGAATGTCTCTATAGGCTCTAGGGAAGGAGCTATTCTGGAGGATAATTTTGCTTCGCCTACAGAGCtgagaaaacaaatgaaaactgTGGCTGACTTTAGGAGCCCTACTCGGGAGTATTCTAGAACTATGGACAAACTGGATGTTCCACCGGGCTTTGAAGCAAAACGGAGATG 1481 0.4078 MLRPGVAHRVDPCDICGAVGYPELIMTCCKCKIAREHVYCMRVYPKEIQDWFCEFCLSRNETISPKYGGNKNLSSSQACFRRKIPVATGKVKFIPEEEVIKLSRGQFALKSGPANSFTCLARKTSVGSKNAIPKNSTLAVKPNPSIRPTDGNIPTDNRVEKSLMANQQAPHSIHKVVSASERKAPNTPAKEYDCREQSPRFVRPINKPESCLPVVSSGGAFHDVDEFIRSNVEERDLQSLLTKFKLYLSYLPSLDVSWRGGFKFNCAAASGEFYGAFQAQPPCTIHRKAYKSSLQMPPILEVEPICTSLLLTDLFQNDCPDLQDVALYFFPSDNTERSRQSLNSVFELLNVNNSTLKCAINGVELLMFTSKQLDVDSQGIIARVTAEYFLWGVFRQVKYDKIAKRSSDMEVVSMEIDMLGGIDVGITDLVMQDKPKNVSIGSREGAILEDNFASPTELRKQMKTVADFRSPTREYSRTMDKLDVPPGFEAKRR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00545 493 SUPERFAMILY FYVE/PHD zinc finger 8 60 IPR011011 -
Bva05g00545 493 MobiDBLite consensus disorder prediction 473 493 - -
Bva05g00545 493 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 80 IPR013083 -
Bva05g00545 493 PANTHER ZINC ION-BINDING PROTEIN 8 430 - -
Bva05g00545 493 PANTHER - 8 430 - -
Bva05g00545 493 MobiDBLite consensus disorder prediction 469 493 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00545 - - cam:101495222 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00545 05 2689865 2694795 Bva05g00545 05 2689865 2694795 ECH