Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00544 ATGGCTGCTTTAGCTCTGGCAGTGCTCCTTTTGGCCCTGACTGGGTCTTCAAGTGCCGCTAATTGGTGCGTTTGCAAGGATGGAGGTGATGCAATTCTGCAGAAAACCTTGGACTATGCCTGTGGAGCTGGCGCTGATTGTAACCCTCTTCGTCAAAATGCAGCTTGTTTCCAACCTAACACCGTCAGGGCACATTGCAACTATGCCGTTAACAGCTATTTCCAAAAGAAGGGCCAAGCTGAAAATTCCTGCAACTTTGCAGGAACAGCCACCATTGTTACATCTGATCCCAGCACTTCCGGTTGTGTCTACCCTTCCAGTGCCAGCACTACAGGTACTAGTACAACCCCTGTCTCGACCACACCAACCACCGTCACCCCCATCACCGGAACCCCATCAACGACTACAGGCACCACAACCACACCCTCATCCACCTCCACAAGCACCACTCCCTACGGCTCAACGCCTGGAGTATTAGGAGGGATTGGCAATGGTATGGGCCCTTCAGGATCTGGCATCAACACAGATGATAGTCATGCTGGGCTTAGACTTGCGGACAGTGCTATGCTTTCTGCATTATCGATGATCCTCTTTTCTGGCTTGATGATGCTTCAGTGGGGTTG 623 0.5152 MAALALAVLLLALTGSSSAANWCVCKDGGDAILQKTLDYACGAGADCNPLRQNAACFQPNTVRAHCNYAVNSYFQKKGQAENSCNFAGTATIVTSDPSTSGCVYPSSASTTGTSTTPVSTTPTTVTPITGTPSTTTGTTTTPSSTSTSTTPYGSTPGVLGGIGNGMGPSGSGINTDDSHAGLRLADSAMLSALSMILFSGLMMLQWG 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00544 207 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 195 - -
Bva05g00544 207 MobiDBLite consensus disorder prediction 105 154 - -
Bva05g00544 207 Pfam X8 domain 22 91 IPR012946 -
Bva05g00544 207 Gene3D - 16 118 - -
Bva05g00544 207 PANTHER BETA-1,3 GLUCANASE 1 195 IPR044788 -
Bva05g00544 207 SMART X8_cls 21 104 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00544 Bva-Chr5 2682929 2688422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00544 14 105 Glycoside Hydrolase AT4G34480 44.086 5.25e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00544 - - gmx:100500078 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01155 06 9109999 9113852 Bva05g00544 05 2682929 2688422 ECH
Bva05g00544 05 2682929 2688422 Bva05g00544 05 2682929 2688422 ECH