Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00529 ATGCGATCCACTGGCATTGTTGCTTTCCGCGACTCCAAATTGAAGACATTTCCCGATGAAATTCTTGATCTAGACCGATCTGTACGCACTCTTGACTTAACAAATAATCGTATAGTTGACATTCCGGTGGAAATCGgcaaattaactaatttgcAGCGCCTGTTATTAGCTGATAACGTCATTGAGAGACTCCCAGTGAATTTGGGGAAACTTCAATCTCTAAAAGTTATAATCCTTGATGGAAATCGTATTACTTCCTTGCCTGATGAAATTAGGCTTGAACGCTTATCCATCTCGGGAAATTTGTTAACAAGCTTGCCTACGACTATTGGCAGCTTGAGGAATctattaattttcaatgtGTCGAATAACAAGTTAAAGTCTCTTCCAGAATCTGTTGGGTCTTGTTTCTCTCTAGAAGAATTGATAGCCAATGAGAATCTCATTGAAGATCTTCCTTCTTCAGTATGCAATCTGGTTCACTTGAAGTCGCTTTCCTTAGATAAGAATAATGTGAAGCAGATACCTCTTAATCTATTGAAAGACTGCAAAGCTCTTCAGAACATTTCTCTGCATGGTAATCCTATATCAATGGATCAATTTCAGCAAATGGATGGGTTTCAAGAGTTTGAAGCACGGAGGAGAAAGAAGTTCGACAAACAAATTGTTTCGAATGTGATTATTAGCTCCAAAGGTCTCGATGAGGGTGTCGATCTATG 719 0.3769 MRSTGIVAFRDSKLKTFPDEILDLDRSVRTLDLTNNRIVDIPVEIGKLTNLQRLLLADNVIERLPVNLGKLQSLKVIILDGNRITSLPDEIRLERLSISGNLLTSLPTTIGSLRNLLIFNVSNNKLKSLPESVGSCFSLEELIANENLIEDLPSSVCNLVHLKSLSLDKNNVKQIPLNLLKDCKALQNISLHGNPISMDQFQQMDGFQEFEARRRKKFDKQIVSNVIISSKGLDEGVDL 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00529 239 SUPERFAMILY RNI-like 13 201 - -
Bva05g00529 239 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN-RELATED 2 231 - -
Bva05g00529 239 PANTHER LEUCINE-RICH REPEAT-CONTAINING 2 231 - -
Bva05g00529 239 Pfam Leucine rich repeat 26 84 IPR001611 GO:0005515
Bva05g00529 239 ProSiteProfiles Leucine-rich repeat profile. 27 48 IPR001611 GO:0005515
Bva05g00529 239 Gene3D Ribonuclease Inhibitor 2 217 IPR032675 -
Bva05g00529 239 SMART LRR_bac_2 138 155 - -
Bva05g00529 239 SMART LRR_bac_2 113 132 - -
Bva05g00529 239 SMART LRR_bac_2 92 109 - -
Bva05g00529 239 SMART LRR_bac_2 71 90 - -
Bva05g00529 239 ProSiteProfiles Leucine-rich repeat profile. 73 94 IPR001611 GO:0005515
Bva05g00529 239 SMART LRR_typ_2 113 136 IPR003591 -
Bva05g00529 239 SMART LRR_typ_2 48 70 IPR003591 -
Bva05g00529 239 SMART LRR_typ_2 159 182 IPR003591 -
Bva05g00529 239 SMART LRR_typ_2 71 93 IPR003591 -
Bva05g00529 239 SMART LRR_typ_2 26 47 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00529 Bva-Chr5 2603571 2606881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00529 28 202 Receptor kinase-like Gene Family AT5G20480 31.892 4.62e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00529 - - gmx:100807758 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00529 05 2603571 2606881 Bva05g00529 05 2603571 2606881 ECH