Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00524 ATGGCTTCCGCTTCAGTATCGAGGTCAGAGGTGCTCTCTTTGTTCCGAGCTCTGCTGCGGACATCTCGTGAATTCTGCGATTACAACGTGAAGGAATACACAAAGCGTCGAACCATTGATGGATTTCGACAGAACCAAACTCTGTCGGACCCGGCTTCCGTTGCTTCGGCTTATTCCGATGGTAAGGCCCAACTCGAGATTGCAAGAAGGCAGGCGATCGTATACTCGCTTTACGCCCCCAAGATTAAGAACATCATGGAGTTAAACTG 269 0.4981 MASASVSRSEVLSLFRALLRTSREFCDYNVKEYTKRRTIDGFRQNQTLSDPASVASAYSDGKAQLEIARRQAIVYSLYAPKIKNIMELN 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00524 89 Pfam Complex 1 protein (LYR family) 10 66 IPR008011 -
Bva05g00524 89 CDD Complex1_LYR_LYRM4 10 78 IPR045297 GO:0016226
Bva05g00524 89 PANTHER OS08G0239000 PROTEIN 2 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00524 Bva-Chr5 2582223 2582492 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00524 K22069 - qsu:112029639 137.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00524 05 2582223 2582492 Bva05g00524 05 2582223 2582492 ECH