Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00506 ATGGGGCAAGAAAGTCACGCAGCTCAGAAGAGAAGTAGTGGAAGTGTGTTGCCGACTAGTAGAGGCCGTTCATTTGGTAACTTACCCCGTAGCCGGCAGATCCACAAAACCTTCAACAATATCAAGATCACCATCCTCTGTGGCTTCGTAACCATCCTCGTCCTCCGCGGCACCATTGGCGTTAACCTCGGAAGCTCAGAGGCTGATGCCGTTAACCAAAACCTCATTGAAGAGACTAACCGTATCCTCGCTGAGATCAGATCTGATAGTGATCCTAACGATCCAGACGAACCCAGCGAGACCGAATTGAATCTAAATATCACCTTCACTCTCGGGCCGAAGATCAGTAACTGGGACCAAGAGCGAAAGGCTTGGCTGGATCAGAATCCCGAGTACCCAAATTACATTAGAGGTAAAGCTCGAATCTTGCTCTTGACTGGCTCACCTCCGAAACCTTGTGACAATCCAATTGGGgatcattatttattgaagTCTATAAAGAATAAGATTGATTACTGTAGATTACATGGGATCGAAATAGTGTATAATATAGCTCATCTGGATAAGGAGCTTGCTGGATATTGGGCAAAATTGCCTATGATTCGGCGTTTGATGTTGTCGCATCCGGAGGTGGAGTGGATTTGGTGGATGGACAGTGATGCCTTCTTTACTGATATGGTCTTTGAGCTTCCCTTATCTAAGTATGATAAGTATAATTTGGTTCTTCATGGgtaccctgatcttctgttcGAGCAAAAGTCATGGATTGCAGTGAATACAGGGAGCTTTCTGTTTAGGAATTGCCAGTGGTCATTAGATTTGCTTGATTCTTGGGCTCCAATGGGTCCTAAAGGTCCCATTCGAGAAGAGGCGGGGAAGATTTTGACTGCAAATCTCAAGGGGAGACCAGCATTTGAGGCAGATGATCAGTCAGCCttgatatatttattgctGTCTAAGAAGGATCAATGGATGGATAAGGTGTTTCTTGAGAACTCATACTATTTGCATGGATATTGGGCTGGTCTGGTTGATAGATATGAAGAGATGATTGAGAAGTATCACCCAGGATTAGGTGACGAGAGGTGGCCATTTGTGACACATTTTGTGGGTTGCAAGCCTTGTGGAAGCTATGGAGATTATCCTGTTGAGAGGTGCCTCAGTAGCATGGAGAGAGCTTTCAATTTTGCAGATAATCAAGTGCTAAAACTATATGGGTTTAGGCATCGCGGCCTATTGAGCCCCAAAATCAAGAGAATCAGAAATGAGACAGTTGTACCTTTAGAATATGTAGACCAATTTGATATACGAAGACTTTCTACGGAGAACAGTGGATCAAAAAGCTA 1346 0.4287 MGQESHAAQKRSSGSVLPTSRGRSFGNLPRSRQIHKTFNNIKITILCGFVTILVLRGTIGVNLGSSEADAVNQNLIEETNRILAEIRSDSDPNDPDEPSETELNLNITFTLGPKISNWDQERKAWLDQNPEYPNYIRGKARILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNIAHLDKELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPLSKYDKYNLVLHGYPDLLFEQKSWIAVNTGSFLFRNCQWSLDLLDSWAPMGPKGPIREEAGKILTANLKGRPAFEADDQSALIYLLLSKKDQWMDKVFLENSYYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVVPLEYVDQFDIRRLSTENSGSKS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00506 448 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 139 284 IPR029044 -
Bva05g00506 448 Pfam galactosyl transferase GMA12/MNN10 family 139 377 IPR008630 GO:0016021|GO:0016757
Bva05g00506 448 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 12 442 IPR008630 GO:0016021|GO:0016757
Bva05g00506 448 MobiDBLite consensus disorder prediction 1 29 - -
Bva05g00506 448 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 12 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00506 Bva-Chr5 2470304 2472393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00506 3 440 Glycosyltransferase AT5G07720 79.545 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00506 K08238 - zju:107419204 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00506 05 2470304 2472393 Bva05g00506 05 2470304 2472393 ECH