Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00504 ATGGGTCCGAAGGATGACCGATCCGAAATTGTGTTCTTCGACGTTGAAACCACCGTCCCAACCCGACCCGGCCAGAGATTTTCCATATTGGAGTTCGGAGCAATTTTGGTCTGCCCCAGGAAGCTAACTGAGCTCCTTAGCTACGCCAAGTTAGTCAGACCAGCTGATCTTTCCCTCATCTCGTCCTTGTCCGAACGCTGTAATGGCATCACCCGTGAAGCTGTTGGGTCTGCTCCTACTTTCGCGGAAATCGCTGATGAGGTTTATGACCTTCTACATGGACGGATATGGGCTGGTCACaatatattaagatttgaCTGTGTTCGGATCAGAGATGCTTTTGCTGAGATTAATCGACCAGCACCGGAACCCAAGGGTGCTATTGATTCGTTAGTTTTGTTAACTCAGAAATTTGGACGAAGAGCAGGGGATATGAAGATGGCCACTCTTGCAACATATTTTGGGCTTGGCCGGCAGTCACACAGGAGCTTAGATGATGTGCGTATGAATCTTGAAGTCCTCAAATATTGTGCAACAGTTTTACTCTTGGAATCAAGTCTCCCAGATGTCTTCACAGAAAATTGCTGGGTTTCTCCGAATGCTATTACAAGAAGTCGTAGTAATGGGAAATTTTCTCCAGATGAGAAACTTTCTAGAATGAGCAACCCATCATCGTCATTATTATATGCTTCAAATTCAAGTAGAGAGGAAACCCATCCAATACTTTCTCTTACAACGTGCAGCTCGAAGGCGGCAATGCCAAATTTTACAGATACAAATTCTTTTGACATGGTTTCTCTTAGTAATGAGATGGAAAGAGAATCCCTTCAATCAGCTGCTGCCATGGACGAAAAAAACATGCAAGCATTACCAGGGATGTCTTCCTCTACTGCCATGTCCGAGGGTTGTGGCAGCTCTACTCATGTTTTAGGGCCTGATGATATACGTATCACTTCTATCAGTGCATCTCTTGTTCCATTTTATCATGGGAGTCAAAGGATAGAATTATTGCATAACGGCTTCACCTTCCAGCTTTATTGTACTGGTTTGAAAGTAAGATTTGGACTAAGCACAAAATTTGTCGATCATGGTGGCCGGCCACGGTTGAGCTTTGTGGTTGATGCATCTCAAAGTTTATGCAAGGTTCTTGATGCATGTGACGGTATTGCACAAAAGTTGTATTCCGACTCCGATAACCGGTCTGATTGGAAACCTGTTGTTACCAGAAAAGAAGGTTTCTTCAACTATCCTACCGTGAGATTACATATACCGACCGAAGTAAGCGATAACATTGCCAAGTATGCCACGGAGATGTACCAGAGAGAATCATCTGGCACCGTGCAAAGACTTCTCTTCAGTAAGTTTGATGCTGCGGAGCTTGAACCCTTGTTCACGCCTGGGATACTTGTTGATGCGTTATTTTCCTTGGATACTTATGACTATCAACAGATTGCAGGGATTAGATTAGTGGCCAAAAAAATGATCATCAATGATCAGCCACAACATGCCCTATTGAATTG 1520 0.4368 MGPKDDRSEIVFFDVETTVPTRPGQRFSILEFGAILVCPRKLTELLSYAKLVRPADLSLISSLSERCNGITREAVGSAPTFAEIADEVYDLLHGRIWAGHNILRFDCVRIRDAFAEINRPAPEPKGAIDSLVLLTQKFGRRAGDMKMATLATYFGLGRQSHRSLDDVRMNLEVLKYCATVLLLESSLPDVFTENCWVSPNAITRSRSNGKFSPDEKLSRMSNPSSSLLYASNSSREETHPILSLTTCSSKAAMPNFTDTNSFDMVSLSNEMERESLQSAAAMDEKNMQALPGMSSSTAMSEGCGSSTHVLGPDDIRITSISASLVPFYHGSQRIELLHNGFTFQLYCTGLKVRFGLSTKFVDHGGRPRLSFVVDASQSLCKVLDACDGIAQKLYSDSDNRSDWKPVVTRKEGFFNYPTVRLHIPTEVSDNIAKYATEMYQRESSGTVQRLLFSKFDAAELEPLFTPGILVDALFSLDTYDYQQIAGIRLVAKKMIINDQPQHALLN 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00504 506 MobiDBLite consensus disorder prediction 207 233 - -
Bva05g00504 506 CDD DEDDh 11 175 - -
Bva05g00504 506 SMART exoiiiendus 9 183 IPR013520 -
Bva05g00504 506 Pfam Exonuclease 11 174 IPR013520 -
Bva05g00504 506 Gene3D - 4 181 IPR036397 GO:0003676
Bva05g00504 506 PANTHER PROTEIN NEN3 5 497 - -
Bva05g00504 506 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 5 497 - -
Bva05g00504 506 SUPERFAMILY Ribonuclease H-like 8 178 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00504 Bva-Chr5 2458096 2461689 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00504 - - ccaj:109808157 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00504 05 2458096 2461689 Bva05g00504 05 2458096 2461689 ECH