Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00486 ATGGTTGGATCATCAGAAAATCTAGTTGCCTCTCTTTTCCTATATTGGGGACTCTCTCATGTTGGAAACAACAGGTACCTCTCCAGGAGCCTTGCTCAGGCAAGCTTGCCTTGGTATGGTATTGACTTTGGCAACGGATTGCCCAATGGCAGGTTCTCTAACGGTCGCACTGTTGCTGATATTATGGACAGAATGGGGCTCCCAAGGTCACCTGCATTCGTGGATCCATCTTTAACTGAAGATGTTATATTGGAAACAGGAGTCAATTATGCTTCTGGAGGTGGTGGCATCCTGAATGAATCTGGCAGCTATTTTATTCACAGGTTTTCTCTCTACAAACAGATCGAGCTGTTTCAGGGAACTCAAGAACTAGTTAGAAGCAAAATTGGCAAAGAGGCTGCAGATGATTTTTTCCAGGAAGCTCGTTATGTTGTTGTTCTAGGGAGTAATGACTTCATCAAGTCGAGGCATGCATACCTGCATCAAGATTGTGCAAAGATAGAAGCAGGTATGTGTTTTGGGATGAGTATCACCCCACAGTCAGTGCTAACGAGCTCATCAAGAAGTTCAAGTTTTTACTTCTTGATCAAACAGGTGCTTCCTTCACCAGCGCCTGCACTTGCTCCATCTCCAGAAGATTA 641 0.4446 MVGSSENLVASLFLYWGLSHVGNNRYLSRSLAQASLPWYGIDFGNGLPNGRFSNGRTVADIMDRMGLPRSPAFVDPSLTEDVILETGVNYASGGGGILNESGSYFIHRFSLYKQIELFQGTQELVRSKIGKEAADDFFQEARYVVVLGSNDFIKSRHAYLHQDCAKIEAGMCFGMSITPQSVLTSSSRSSSFYFLIKQVLPSPAPALAPSPED 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00486 213 Gene3D SGNH hydrolase 17 189 IPR036514 -
Bva05g00486 213 PANTHER OS06G0229400 PROTEIN 17 161 - -
Bva05g00486 213 Pfam GDSL-like Lipase/Acylhydrolase 19 159 IPR001087 GO:0016788
Bva05g00486 213 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 17 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00486 Bva-Chr5 2386028 2387227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00486 2 160 Acyl Lipid Metabolism Gene Families AT4G10950 37.037 3.15e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00486 - - gmx:100803991 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00486 05 2386028 2387227 Bva05g00486 05 2386028 2387227 ECH