Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00485 ATGAACTCCATTGCTCTCAAATCCTTCGTCGGACTCCGGCAATCCTCGCCGGAAAAGCCCCAACTCTCTGTCCAAGCAAAGCCTGTTACCGTCCACCACCGGAAGATGAAAGTGATAGCCGGTATATCGAGCCCCAAATTGTCGGGTCGAAACCTCCGGGTAGCCGTGATCGGCGGTGGCCCAGCTGGTGGGTCAGCTGCGGAGACATTAGGGAAAGGTGGTATCGAGACATACTTAATCGAGCGGAAATTGGACAACTGCAAGCCCTGCGGCGGAGCAATTCCTCTGTGCATGGTTGGAGAGTTCGATTTACCTCTGGACATCATAGATCGACGGGTcacaaaaatgaagatgatttCCCCATCAAACGTCGCCGTCGACATAGGCCGGACCCTTAAACCTCACGAGTACATTGGAATGGTTCGGCGTGAGGTACTAGATGCATACCTTCGGGAACGGGCCAAAGAAAATGGAGCCAATGTTATAAACGGCTTGTTCTTGAAAATGGATATTCCCAAAGATAAGAATGCCCCTTATGTCTTGCACTACTCCGCCTACGACGGCAGTGGAACCGGTGAAAGGAAAACTTTAGAAGTTGATGCTGTGATTGGAGCTGATGGCGCTAATTCCAGAGTCGCCAAGTCTATCAATGCCGGCGACTACGACTATGCCATCGCATTTCAGGAGAGGATAAAAATTCCAGATGACAAAATGGTTTACTACGAGAACCTGGCTGAGATGTACGTTGGCGATGATGTTTCTCCTGATTTCTACGGGTGGGTGTTTCCGAAATGCGACCATGTTGCTGTTGGCACTGGCACAGTGACTCATAAGGGGGACATCAAGAAGTTCCAACTTGCTACGAGGAACAGAGCGAAGGACAAGATTTTGGGAGGCAAAATCATCCGAGTTGAGGCACACCCGATCCCAGAACATCCTCGTCCACGAAGATTGTCAGGGAGAGTGGCATTAGTGGGGGATGCCGCTGGGTATGTGACCAAATGCTCCGGGGAAGGAATCTATTTTGCAGCAAAGAGTGGGAGAATGTGTGCAGAGGCGATCGTTGAAGGTTCAGAGAATGGGAAGAGAATGGTGGAAGAAGGAGACTTGAGGAAGTACTTGGAGAAGTGGGATAAGAGTTACTGGCCAACTTACAAGGTTTTGGATGTGTTGCAGAAGGTTTTCTACAGGTCCAATCCAGCGAGAGAGGCTTTTGTGGAGATGTGTGCAGATGAGTATGTGCAGAAGATGACCTTTGATAGCTATTTGTACAAGACAGTGGCACCTGGGAATCCTCTGCAGGATTTGAAGTTGGCCATTAACACCATTGGCAGCTTGGTCAGGGCTAATGCAATCAGAAGGGAGATGCAAAAGCTTAATGTATG 1385 0.4895 MNSIALKSFVGLRQSSPEKPQLSVQAKPVTVHHRKMKVIAGISSPKLSGRNLRVAVIGGGPAGGSAAETLGKGGIETYLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISPSNVAVDIGRTLKPHEYIGMVRREVLDAYLRERAKENGANVINGLFLKMDIPKDKNAPYVLHYSAYDGSGTGERKTLEVDAVIGADGANSRVAKSINAGDYDYAIAFQERIKIPDDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMVEEGDLRKYLEKWDKSYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVAPGNPLQDLKLAINTIGSLVRANAIRREMQKLNV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00485 461 Gene3D - 51 460 IPR036188 -
Bva05g00485 461 TIGRFAM ChlP: geranylgeranyl reductase 52 448 IPR011774 GO:0045550
Bva05g00485 461 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 198 213 - -
Bva05g00485 461 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 53 75 - -
Bva05g00485 461 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 319 334 - -
Bva05g00485 461 PANTHER OS01G0265000 PROTEIN 26 460 - -
Bva05g00485 461 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 216 IPR023753 GO:0016491
Bva05g00485 461 SUPERFAMILY FAD/NAD(P)-binding domain 52 432 IPR036188 -
Bva05g00485 461 PANTHER GERANYLGERANYL DIPHOSPHATE REDUCTASE 26 460 - -
Bva05g00485 461 TIGRFAM GG-red-SF: geranylgeranyl reductase family 54 354 IPR011777 GO:0016628
Bva05g00485 461 TIGRFAM BchP-ChlP: geranylgeranyl reductase 53 448 IPR010253 GO:0015979|GO:0015995|GO:0045550
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00485 Bva-Chr5 2383393 2385060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00485 K10960 - gmx:100814603 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00485 05 2383393 2385060 Bva05g00485 05 2383393 2385060 ECH