Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00479 ATGTCAGAAAAGACCATAGTCccctcaaaatttatattttgcgTAATGGTAATTTCTATGTTCCTCTTGGCCGTGTCTTCTATTTTCCTGCTTCAGTTTAGCAATCATTCTTTGATACCTCGATCAGTGTTAGAGCTGATTCTTGTCAATAATACATCATTTTACtacaaacataatttaaaaagggAACCGAGTAAACCTCCTTCGTTCCCTCCTGAAGATTTTCCAATAAATGCCCAAAGAGAATTGGCCTGTCAAGTTTCCAATTCAAGCCAGAAAATAAGCTTTCTAGTACAGCAAAGGCAGATGTCATGTGACCCAACTCAGGCTCTCTTGAGAGTGTTCATGTATGACTTGCCTCCAGAGTTTCACTTTGGGTTGCTCAATTGGAAGGGAAAGGTGAACCAAACATGGCCAAATTTGGCTAACCTAAAGCGCATCCCACCATATCCAGGTGGACTGAATTTGCAGCACAGTGTGGAATATTGGCTCACCCTTGATCTTCTCTCATCAAACACTGCAAAAGTTGTAAGACCTTGCACTGCAATTAGAGTGCAGAATTCGAGTCAAGCAGATGTAATTTTTGTGCCATTTTTCGCATCTGTGAGTTACAACCGTTATTCTAAACTTCATGAAGGGCAGATAGTTAGCGTTAACAAAATGTTGCAAAACAGGTTAGTGGAGTATTTAATGGGCCAGAAAGAATGGAAACGTTCAAGAGGGAATGATCATCTCATTGTGGCCCACCATCCTAACAGCATGTTGGATGCCAGAAAAAAGTTGGGTTCCGCCATGTTTGTGCTTGCAGATTTTGGAAGGTATCGTGCTGAATTAGCaaacataaagaaagataTCATAGCTCCCTATAGGCATCTGGTAAGCACCATACCAAGAGCTAAATCAGCTTCATATGAGCAGCGTCCCACACTGGTGTATTTCCAAGGGGCAATATACAGGAAAGATGGAGGAGCTATTCGCCAAGAATTGTATTATTTGCTCAAAGATGAGGAAGATGTGCACTTTGCATTTGGAAACATCAAAGGAAATGGTATCAACCAGGCAGGCCAAGGAATGGCCTCATCCAAATTCTGCTTGAATATTGCTGGAGATACCCCTTCCTCCAATCGTCTTTTTGATGCCATAGTGAGCCACTGTGTTCCTGTGATCATCAGTGATGAAATTGAACTGCCATTTGAAGATGTCTTAGACTACTCAGAATTTTGCTTATTTGTCCGTGCCGTTGATGCTGTAAGGAAAGGATACCTCCTCAATCTTCTCCGTTCAATCAAGCAAGATAAGTGGACCAAGATGTGGGAAAGACTAAAGGAAATTGCACATCACTTTGAGTATCAATATCCATCCCACCCTAGGGATGCAGTGAATTTAATCTGGGAGGAAGTCGCACACAAGATATCTTCAATGCGGCTTAACTTGCACAGGAACAAGAGATACCAAAGGTCTCAGCTTCTTGCAAAGACCAACTG 1484 0.4063 MSEKTIVPSKFIFCVMVISMFLLAVSSIFLLQFSNHSLIPRSVLELILVNNTSFYYKHNLKREPSKPPSFPPEDFPINAQRELACQVSNSSQKISFLVQQRQMSCDPTQALLRVFMYDLPPEFHFGLLNWKGKVNQTWPNLANLKRIPPYPGGLNLQHSVEYWLTLDLLSSNTAKVVRPCTAIRVQNSSQADVIFVPFFASVSYNRYSKLHEGQIVSVNKMLQNRLVEYLMGQKEWKRSRGNDHLIVAHHPNSMLDARKKLGSAMFVLADFGRYRAELANIKKDIIAPYRHLVSTIPRAKSASYEQRPTLVYFQGAIYRKDGGAIRQELYYLLKDEEDVHFAFGNIKGNGINQAGQGMASSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFCLFVRAVDAVRKGYLLNLLRSIKQDKWTKMWERLKEIAHHFEYQYPSHPRDAVNLIWEEVAHKISSMRLNLHRNKRYQRSQLLAKTN 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00479 494 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 3 481 IPR004263 GO:0006486|GO:0016757
Bva05g00479 494 PANTHER EXOSTOSIN FAMILY-LIKE PROTEIN 3 481 - -
Bva05g00479 494 Pfam Exostosin family 111 424 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00479 Bva-Chr5 2364681 2367702 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00479 - - gmx:100795371 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00479 05 2364681 2367702 Bva05g00479 05 2364681 2367702 ECH