Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00470 ATGGTGGCCGACAAGTCCAAGAAGATGAAAGTTTCCGAAAAAGGAGAGGAGATGGAGGATATTGATGGAGAGCTTGTTCATTCCATTGAAAAGTTGCAGGAGATCCAAGACGAGCTGGAAAAGATCAACGAGGAGGCAAGTGATAAAGTCCTCGAAATTGAGCAGAAGTACAATGTGTTAAGGAAGCCAGTCTATGATAAGCGAAATGAGATCATCAAATCTATTCCCGACTTCTGGATGACAGctTTTATGAGTCATCCCGCCCTTGGTGAGCTTCTGAATGAGGAAGATCATAAGGTTTTTAAGTATCTAAGTTCTCTGGAGGTTGAAGATTCCAAAGATGTCAAATCAGGCTACTCAATTACTTTCAATTTCAATTCCAATCCCTATTTTGAGAATGAAAAGCTTGTAAAGACTTTTACCTTCCACGAAGAAGGATCAACGAAGATCACATCTACGCCTATAAAATGGAAAGAAGGCAAGGGCATACCTAACGGTGTAAGTCATGAGAAGAAAGGGAACAAGCGGGCTCCAACTGATGTCAGCTTCTTTAGTTGGTTTAGTGACACTGAGCAGAAAGATGACATGGACGATATTCATGATGAGGTTGCAGAAATCATCAAGGATGATTTATGGCCAAATCCGCtcaattatttcaataatGATGCTGATGAAGAGGATGTTGATGAGGAAGGTGATGACGAGgaAAAAGACGAGGATGACTCTGAAGACGATGATGACCAAGATGAGGATGACGACGATGAGGGTGAGGGTGAGGAGGAGGATGGCAAGTG 794 0.4169 MVADKSKKMKVSEKGEEMEDIDGELVHSIEKLQEIQDELEKINEEASDKVLEIEQKYNVLRKPVYDKRNEIIKSIPDFWMTAFMSHPALGELLNEEDHKVFKYLSSLEVEDSKDVKSGYSITFNFNSNPYFENEKLVKTFTFHEEGSTKITSTPIKWKEGKGIPNGVSHEKKGNKRAPTDVSFFSWFSDTEQKDDMDDIHDEVAEIIKDDLWPNPLNYFNNDADEEDVDEEGDDEEKDEDDSEDDDDQDEDDDDEGEGEEEDGK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00470 264 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 250 IPR002164 GO:0005634|GO:0006334
Bva05g00470 264 Coils Coil 25 56 - -
Bva05g00470 264 Gene3D - 1 75 - -
Bva05g00470 264 SUPERFAMILY NAP-like 6 220 IPR037231 -
Bva05g00470 264 MobiDBLite consensus disorder prediction 212 264 - -
Bva05g00470 264 MobiDBLite consensus disorder prediction 222 264 - -
Bva05g00470 264 Pfam Nucleosome assembly protein (NAP) 28 73 IPR002164 GO:0005634|GO:0006334
Bva05g00470 264 Pfam Nucleosome assembly protein (NAP) 73 221 IPR002164 GO:0005634|GO:0006334
Bva05g00470 264 MobiDBLite consensus disorder prediction 156 176 - -
Bva05g00470 264 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 250 - -
Bva05g00470 264 MobiDBLite consensus disorder prediction 1 23 - -
Bva05g00470 264 Gene3D Nucleosome assembly protein 76 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00470 Bva-Chr5 2317442 2321332 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00470 K11290 - gmx:100793432 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01230 06 9500168 9504061 Bva05g00470 05 2317442 2321332 BWGD
Bva06g01230 06 9500168 9504061 Bva05g00470 05 2317442 2321332 ECH
Bva05g00470 05 2317442 2321332 Bva05g00470 05 2317442 2321332 ECH