Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00457 ATGTCAAAGGTATCGTTGATTTGCTTTATTCTTCTGGGACTTGTGCTCCTTTCTCAGGCATCATCATCTGATGAGAAGATTGGATTTTATGAGCTGAAGAAAGGAAATTTCAAACTAAACATTACTAACTATGGTGCAACAATAATCTCTGTTATGCTTCCTGATAAACATGGAAATGTTGCCGATGTGGTCCTTGGCTTCGATAACATAGAAGCTTACAAGAATGATACAGTTTATTTTGGTGCTCTTATTGGACGTGTAGCAAATAGAATTGGAGGAGCTCAGTTTACTTTGGATGGGAAAACATACAAATTGCCATCTAATGATGGGAAGAACACACTCCATGGTGGCCCTAGGGGATTTTCTGATGTTATTTGGACAGTGAAGACTCATAAAGAAGACAATCACATAACATTCACCTATGATAGTTCTGATAATGAAGAAGGATTTCCTGGTAAGTTGTCCGTGGCAGTGACATATATGATCATTGGAGGCAACAAATTGGGTGTGAAAATGGAAGCTGTGCCCATTGACAAGGCCACGCCAGTAAATCTAGCTCAGCACTCTTACTGGAACTTGGGAGGACACGACAGTGGTAACATTCTTTCACACACCATCAAGCTTCATGCCTCAAACATCACACCAACAGACAAGGATCTCATCCCCACCGGTGAAATCAAATCTGTCAAAGGAACGCCATATGATTTTCTTGAACCAAGAGTGATCGGTGACCGGATTAATGAGAATTTTGTGGGCTATGACATTAACTATGTGTTGGACAAAGGTAGCAGTGAGCACTTCAGGAAGGTGGCAACTGTGGAGCACCGTAACTCTGGGAGAAAGATGGAGCTGTGGACAAACCAACCTGGTGTGCAGTTCTATACTAGCACCTCCTTGAAAGATACCAAGGGAAAGGGTGGCGTGACATACAAGAGATATGCTGCTTTGTGCTTAGAGACACAGGGTTTCCCTGACTCTGTCAATCATGATAATTTTCCATCTCAAATTGTGCGTCCTGGTGAGAAATATAAGCACTACATGGTTTATAGGTTCACCGCTACCTA 1064 0.4211 MSKVSLICFILLGLVLLSQASSSDEKIGFYELKKGNFKLNITNYGATIISVMLPDKHGNVADVVLGFDNIEAYKNDTVYFGALIGRVANRIGGAQFTLDGKTYKLPSNDGKNTLHGGPRGFSDVIWTVKTHKEDNHITFTYDSSDNEEGFPGKLSVAVTYMIIGGNKLGVKMEAVPIDKATPVNLAQHSYWNLGGHDSGNILSHTIKLHASNITPTDKDLIPTGEIKSVKGTPYDFLEPRVIGDRINENFVGYDINYVLDKGSSEHFRKVATVEHRNSGRKMELWTNQPGVQFYTSTSLKDTKGKGGVTYKRYAALCLETQGFPDSVNHDNFPSQIVRPGEKYKHYMVYRFTAT 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00457 354 PANTHER ALDOSE 1-EPIMERASE 5 353 - -
Bva05g00457 354 Pfam Aldose 1-epimerase 30 350 IPR008183 GO:0005975|GO:0016853
Bva05g00457 354 CDD galactose_mutarotase_like 30 351 - -
Bva05g00457 354 Gene3D - 18 353 IPR014718 GO:0030246
Bva05g00457 354 SUPERFAMILY Galactose mutarotase-like 22 351 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bva05g00457 354 PIRSF GALM 17 354 IPR015443 GO:0016853|GO:0019318
Bva05g00457 354 PANTHER ALDOSE-1-EPIMERASE 5 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00457 Bva-Chr5 2257085 2258689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00457 2 353 Miscellaneous Gene Families AT3G47800 61.932 2.67e-162 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00457 K01785 - gmx:102659620 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01244 06 9570415 9572562 Bva05g00457 05 2257085 2258689 ECH
Bva05g00457 05 2257085 2258689 Bva05g00457 05 2257085 2258689 ECH