Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00450 ATGGAGCATCAATGGCGTTCTCGATCGGTCCAAGGTAGTGTGTGCCCTACCTGCTTAGTCTCTCACTTGCCATTTTGCCCTCCACCCCCGTCATACTGTCAACACCCTAGATTTCCATTCGGCCCCGATCACTCCTTTCAAAGACCAGGTTTCAGTCCTTATACAGCTCTCCCGCCTCGGGGCGCCCATCAGCCATATGTGGCCAACCGGAATGATGGCTTCGCTGATCCCAGTATCTGGCCTGGGAACCCTAATTGGGAAAGAGAATCGCACTCGCATGGGCAATTACCGTTCCATCATCCCAGTCCACCACTGTATGAACACGTTGTTGAAGGTGATAGAAACTTGAAGAGGCCGAGGACTGATGATTCTGGTTCCGGCCCTTTCACTAATGATTATGATAAACATCCTGCTAGAATTTTATCTGAGGATGAGCGGAGATTGAAGTTGATTCGCGATCATGGAGGCGTTCTTAGTAAGCCGCCTGAAGAGCAGAGTCATCATAGACCTAGGTTTGAGGAGTGTCCAAGTTATGATAACTTGTCAGGCAGTGGAAATACAGCAGCGGTGAATAACCCAGGGCATTCTTTACACGGAGACGAACGTAATTTATCTTCCGGGCAACAATATAAGCAACATCACCAAAACGGGTTTTTCAAAAACTCTTCATATCCTTTCCAGAATTCTGGAATTAATAACTTAGATCCACAGCAGCATATATCTCAGCATGGACCACGATATTCTCAAAGGGAAAGCGGGCAAGGCATGACTGGACCATATCCGCATCACGTTAATTCTGATTCCGGCAAATTGCTACCTCAACCCGATGGAACGCAGAATCCTGTTCATACGAGACATGAGGTGAATTTTGCATTTCAGGAAGGAAATCAAACTCAGCTTGGGCAACAGGATATGTCATCGGTATCTCAACGTGGCGCATCAAATTGTAATGAAAGAGGAGCCTACCATCCCTATCCTTACAGTACTGGTAGCAGCAATACCTCTACAAACATGGGTCAAATGGATTCTTCTGGATTCTTCAGTGCCAAGCCTCCTCTTCCTTCTACTCCACCACCTCCCCTTCCTGTGGATCCGCCCATTAATCCATCTTCTGGCTTGAAAACCTACTTTTCTCCACCCAAGGCATCTGCTTCGCTTTTTCCTGTTCCTGTCAGTTCCTCTGCTGCAGTTCCTACATCATATCCGCCAATTCCTGAAGCTCATTCCTTGCCCCATGGCTATTTCCATAGCAAACCCCTTCCACAAGTTTCGACTGGCTCATATCAAGAGGAACCTTCTCAGCAATACAGAGATGCCCAACCTTTTTCACTAAGGCAATTATCTGCTGATAAACCAAAAGTTATTGATGCTTCCCACTTATTCAAGCATCCGCATCGAGCTACACGTCCTGATCATATTGTAATCATCCTTAGAGGGCTTCCAGGTAGTGGTAAGAGTTACTTGGCAAAGATGTTACGTGATCTTGAGCTGGAAAATGGTGGTGATGCCCCACGAATTCATTCTATGGATGATTATTTCATGACTGAGGTTGAAAAGGTTGAAGACAATGGCACTTCAAAGTCTTTGAGTTCAGGCAGAGGCAAGAAGGCTGTAACAAAGAAAGTGATGGAGTATTGTTATGAACCTGAGATGGAGGAGGCTTACCGGTCAAGCATGTTGAAGGCATTCAAGAAGACCGTTGAGGAGGGTGTTTTCACCTTCATAATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGagaTTGGGCTACGAAGTTTACATCTTAGAAGCTACTTACAAGGACCCTGCGGGTTGTGCAGCGAGGAATGTGCATGGATTTACACAGGATGACATTGAAAAGATGGCTGGGAAATGGGAAGAAGCTCCGTCATTATACCTGCAGTTGGATGTGAAGTCATTATTTCATGGAGATGATTTGAAGGAAAGCAGAATCCTGGAGGTGGACATGGATATGGAAGATGAAGATCTTGGTGATGCTTTACCTGCAGTGGAAGGAAGAGAGGCTGAGAAAGTTGCAGAACCTCTCATCCAGGAGGATTCGCATGATGGTTCCTCAAATGATGGGAAGAGATCGGATGCTGAAGGAGAAAACCAAGCAGAAGAAGTCAGGGAATTGGGTAAGAGCAAATGGTTGGAAGATTTCGATGAAGATGATAATGTTCAAGCTGATGGTTTGAACGGGAATGTAAATGCTCTTTCGGGCACAATTCATACGTACAGCAAGAAAGGGAAATCTGTACACTGGGGTGACCAGGTTGGCAATAAAGGATTTTCAATAGGTGCCGCAAGGAAGGCAAACGCTTTGTCTTTAATCATTGGACCTGGTGCTGGATATAATCTGAAGTCTAATCCTTTACCCGAAAAGGAGAGTCCGACAACCCTTGGTAACGTGGAACCAAAGAAGCAGAGCATATTCCAAGAGCGTATTCGGGCTGAGCGTGAATCCTTCAAAGCTGTTTTTGACAGGAGACGACAACGGATCGGTGGACTTGATTTAGAGGACTA 2552 0.4581 MEHQWRSRSVQGSVCPTCLVSHLPFCPPPPSYCQHPRFPFGPDHSFQRPGFSPYTALPPRGAHQPYVANRNDGFADPSIWPGNPNWERESHSHGQLPFHHPSPPLYEHVVEGDRNLKRPRTDDSGSGPFTNDYDKHPARILSEDERRLKLIRDHGGVLSKPPEEQSHHRPRFEECPSYDNLSGSGNTAAVNNPGHSLHGDERNLSSGQQYKQHHQNGFFKNSSYPFQNSGINNLDPQQHISQHGPRYSQRESGQGMTGPYPHHVNSDSGKLLPQPDGTQNPVHTRHEVNFAFQEGNQTQLGQQDMSSVSQRGASNCNERGAYHPYPYSTGSSNTSTNMGQMDSSGFFSAKPPLPSTPPPPLPVDPPINPSSGLKTYFSPPKASASLFPVPVSSSAAVPTSYPPIPEAHSLPHGYFHSKPLPQVSTGSYQEEPSQQYRDAQPFSLRQLSADKPKVIDASHLFKHPHRATRPDHIVIILRGLPGSGKSYLAKMLRDLELENGGDAPRIHSMDDYFMTEVEKVEDNGTSKSLSSGRGKKAVTKKVMEYCYEPEMEEAYRSSMLKAFKKTVEEGVFTFIIVDDRNLRVADFAQFWATAKRLGYEVYILEATYKDPAGCAARNVHGFTQDDIEKMAGKWEEAPSLYLQLDVKSLFHGDDLKESRILEVDMDMEDEDLGDALPAVEGREAEKVAEPLIQEDSHDGSSNDGKRSDAEGENQAEEVRELGKSKWLEDFDEDDNVQADGLNGNVNALSGTIHTYSKKGKSVHWGDQVGNKGFSIGAARKANALSLIIGPGAGYNLKSNPLPEKESPTTLGNVEPKKQSIFQERIRAERESFKAVFDRRRQRIGGLDLED 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00450 850 MobiDBLite consensus disorder prediction 154 175 - -
Bva05g00450 850 MobiDBLite consensus disorder prediction 154 282 - -
Bva05g00450 850 MobiDBLite consensus disorder prediction 688 728 - -
Bva05g00450 850 MobiDBLite consensus disorder prediction 179 261 - -
Bva05g00450 850 MobiDBLite consensus disorder prediction 326 344 - -
Bva05g00450 850 MobiDBLite consensus disorder prediction 410 432 - -
Bva05g00450 850 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 3 841 IPR026314 GO:0005634
Bva05g00450 850 MobiDBLite consensus disorder prediction 297 364 - -
Bva05g00450 850 MobiDBLite consensus disorder prediction 297 316 - -
Bva05g00450 850 Gene3D - 473 639 IPR027417 -
Bva05g00450 850 MobiDBLite consensus disorder prediction 116 141 - -
Bva05g00450 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 472 642 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00450 Bva-Chr5 2217110 2224542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00450 K17602 - jre:108999225 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00450 05 2217110 2224542 Bva05g00450 05 2217110 2224542 ECH