Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00444 ATGAGTGAGGGAGATGAAAGTAATGATAAAAGGAAGGCGGTTAGTCAAACTCAAACACAAACTCCAACAAAAAGCCTAAATTTCCTCAACAAAGCACTGATGGAGCCAGTCTACCCAAAATTTCGATGCACGGTAAAGGAAGTAGAAGAGGTCAAGATAGTAATAAGGATTCTTCCCATATTTATGTCCACCATAATGTTAAACTGTTGCCTTGCTCAGCTTTCTACCTTTTCAGTCCAACAGTCAGCCACTATGAATACCAAGCTCGGTTCCTTCAAGGTCCCACCAGCTTCCCTCCCCGTATTCCCTGTCATCTTCATTATGATCCTTGCCCCACTCTATGACCGTATTATTGTTCCATTTGCTCGAAAGGTGACAAAAACTGAAATGGGGATCACGAATTTACAACGAATTGGGATAGGGCTATTTCTCTCTATTGTGGCAATGGCTGTGGCAGCTCTAGTTGAAATCAAGAGGAAGAATGTTGCAATCAAACTTGGTTTGTTAGATTCTACCAAGCCTCTACCGATCACATTCCTATGGATAGCTTTACAATACTTATTTCTTGGTTCAGCAGATCTTTTCACATTGGCTGGCATGATGGAATTCTTTTTTACAGAAGCACCATTAAGCATGAGGTCTTTAGCCACAGCTCTGTCCTGGGCGTCACTAGCCATGGGATACTTCCTCAGCACGGTTCTTGTGTCAATTATCAATAAGGTTACTGGGCTCTCTGGACACACACCATGGCTCGTTGGTAGCAACTTGAATCATTATCACCTTGACAGGTTTTACTGGTTCATGTGTGTACTCAGTGGGTTAAATTTTCTACATTATCTCTTCTGGGCCAATTCTTACAAATACAGATCAACAAGGCCAGGATACTA 887 0.4205 MSEGDESNDKRKAVSQTQTQTPTKSLNFLNKALMEPVYPKFRCTVKEVEEVKIVIRILPIFMSTIMLNCCLAQLSTFSVQQSATMNTKLGSFKVPPASLPVFPVIFIMILAPLYDRIIVPFARKVTKTEMGITNLQRIGIGLFLSIVAMAVAALVEIKRKNVAIKLGLLDSTKPLPITFLWIALQYLFLGSADLFTLAGMMEFFFTEAPLSMRSLATALSWASLAMGYFLSTVLVSIINKVTGLSGHTPWLVGSNLNHYHLDRFYWFMCVLSGLNFLHYLFWANSYKYRSTRPGY 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00444 295 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 8 291 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva05g00444 295 Gene3D MFS general substrate transporter like domains 9 293 IPR036259 -
Bva05g00444 295 Pfam POT family 16 251 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva05g00444 295 MobiDBLite consensus disorder prediction 1 21 - -
Bva05g00444 295 PANTHER PROTEIN NRT1/ PTR FAMILY 4.7 8 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00444 Bva-Chr5 2202264 2203529 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00444 7 291 Organic Solute Cotransporters AT1G69850 68.456 3.98e-146 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00444 - K14638 gmx:100796577 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01262 06 9648731 9651668 Bva05g00444 05 2202264 2203529 ECH
Bva05g00444 05 2202264 2203529 Bva05g00444 05 2202264 2203529 ECH