Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00441 ATGGCGGAATCCATTTCCAACGCCGTTGGCCACAAGGTAGCCGGCAAAGTAGCCATCATCACTGGCGGAGCCAGTGGTATCGGCGCAGCGACCGCGCGTCTCTTTGCCGACGAAGGAGCACGTATGGTTGTTATCGCCGACATCCAAGATGAGCTGGGCAATGAAGTGGCGGCGTCCATTGGCAGCCACAGATGCAGCTTCGTGCACTGTGACGTGACAGACGAAGATCGAGTGAAACACCTTGTGGAATCAACCGTGAACACTCATGGGCAACTGGACATCATGTTTAGCAACGCTGGGATCGTGAGCCCGTCAACTCAGACTGTCCTCGACCTCAAGTTTTCGGAATTTGACCGGTTGTTCGCGGTCAACGTTCGTGGGATGGCGGCGTGTGTGAAAGAGGCGGCGCGTGCGATGGTAGAGAAGGGAGTGAGAGGAAGCATAGTGTGCACGGGAAGTGTAGCAGGGAGCCACGGTATTCCGAGGCGGACGGATTACTCGATGTCAAAGCACGCGGTGTTGGGACTGGTGCGGGCGGCTAGCGTGCAGCTTGCGGGGCATGGGATTAGGGTGAACTGCGTGTCACCGAATGGGATTGCGACGCCGTTGACTTGCAAATTACATGGGTTGGAGATGGAAGAGATGCAAAAGGTGTATGGGCAATTAGCGAGGTTGAAAGGCGTAGTATTCACCCCTAAACACGTGGCCGATGCTGTCTTGTTCCTTTCCTCCGATGACTCCCAGTTTGTCACCGGTCACGATCTCGTTGTCGACGGTAGCCATGTCccactaaaata 797 0.5508 MAESISNAVGHKVAGKVAIITGGASGIGAATARLFADEGARMVVIADIQDELGNEVAASIGSHRCSFVHCDVTDEDRVKHLVESTVNTHGQLDIMFSNAGIVSPSTQTVLDLKFSEFDRLFAVNVRGMAACVKEAARAMVEKGVRGSIVCTGSVAGSHGIPRRTDYSMSKHAVLGLVRAASVQLAGHGIRVNCVSPNGIATPLTCKLHGLEMEEMQKVYGQLARLKGVVFTPKHVADAVLFLSSDDSQFVTGHDLVVDGSHVPLK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00441 265 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 IPR002347 -
Bva05g00441 265 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 IPR002347 -
Bva05g00441 265 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 IPR002347 -
Bva05g00441 265 Gene3D - 5 263 - -
Bva05g00441 265 Pfam Enoyl-(Acyl carrier protein) reductase 22 259 - -
Bva05g00441 265 PANTHER OXIDOREDUCTASE-RELATED 1 262 - -
Bva05g00441 265 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 262 - -
Bva05g00441 265 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 153 181 IPR020904 GO:0016491
Bva05g00441 265 PRINTS Glucose/ribitol dehydrogenase family signature 90 101 IPR002347 -
Bva05g00441 265 PRINTS Glucose/ribitol dehydrogenase family signature 140 156 IPR002347 -
Bva05g00441 265 PRINTS Glucose/ribitol dehydrogenase family signature 187 204 IPR002347 -
Bva05g00441 265 PRINTS Glucose/ribitol dehydrogenase family signature 166 185 IPR002347 -
Bva05g00441 265 PRINTS Glucose/ribitol dehydrogenase family signature 225 245 IPR002347 -
Bva05g00441 265 PRINTS Glucose/ribitol dehydrogenase family signature 17 34 IPR002347 -
Bva05g00441 265 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 259 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00441 Bva-Chr5 2185407 2186537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00441 11 259 Miscellaneous Gene Families AT4G05530 33.730 7.39e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00441 - - gmx:100817513 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00441 05 2185407 2186537 Bva05g00441 05 2185407 2186537 ECH