Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00439 ATGGAGGTGGAGATGGAGAAGAAGAGCAAGGAAACGATTGGTGAGACGTGTGATGATCCTAAGATTAAACACACAGGATGGAAGGTCATGCCCTTCATCATAGGAAATGAAACTTTTGAGAAGCTAGGAGCCATTGGCACCTTATCCAACCTCTTGGTGTATCTTACTACTGTATTCAACCTCAAGAACATTACAGCCACTAATATTGTTACCATCTTCAGTGGCAGCACCAACTTTGCTACCTTGCTCGGAGCATTTTTCTCAGACACATACTTTGGTCGCTACAAGACAATCGGATTCTGCACAGTTGCTTCCTTTGTGGGGTTGCTTATCATACAACTTACCGCAGCGATTAAGAATTTGCATCCACCTAACTGTGGAAAGGAGAGCAGCACATGCAAAGGGCCAACGGCAGGGCAAATGGGATTTCTTGTGCTTGGACTCGGGTCGCTGTTGGTTGGAGCTGCAGGGATCCGACCTTGTAATTTGGCATTCGGAGCTGATCAGTTTAATCCCAACACAGAATCTGGAAAGAAGGGAATAAACAGCTTTTTCAATTGGTACTTCTTTACCTTCACCTTTGCCCAGATGATATCCTTAACAGTAATTATCTATATTCAATCAAACGTGAGCTGGGCAGTGGGCTTGGCAATTCCAGCAGCTTTGATGCTGATATCATGTGCAGTCTTCTTCATGGGAGCCAAAATGTATGTCAAAGTTAAACCAAGTGGTAGTCCCGTGACAAGTATAGTGCGCGTAATAGTGGTagctataaagaaaagaaaactgaaacTACCAGCAGAATATCCATCTCTCTCCCTCTTCAACTATATGCCTCCCAAGTCCATGAACTCCAAGCTGCCTTATACATGTCAATTCAGGTGTCTAGATAAAGCAGCAATTATGACTTCAAAAGATCAAATAAACCCAGATGGATCTCCAATTGATCCGTGGAGCCTTTGCGGTATGCAGCAAGTGGAAGAGGTGAAGTGCTTGGTGAGAGTGATACCCATATGGGTTTCAGCCATCATATATTACTTAGTCATTGTCCAACAGCACACTCTTTTAGTGTTCCAAGCCCTTCAATCAGACAGAAGGATTGGACACAGCAAATTCAAGATCCCAGGAGCATCTTACTTTGTGTTCCTGATGTTGAGCATGACCCTTTGGTTACCCATTTATGACAGAATCGTTGTCCCTTTTCTCCGAAGGCTCACAGGAAAAGAGGGAGGCATCACAGTCCTTCAGAGGATGGGAATCGGCATGGTTCTGTCTACACTCAGCATACTACTATCTGCTGTGGTGGAAGAGCGCAGAAGAACTCTGGCACTGACCAACCCTATAGGAGTTCAACCAAGAAAAGGTGCTATTTCATCGATGTCAGGTTTGTGGTTCATTCCACAGCTAGCACTTGCTGGACTAGCAGAAGCATTTACTTCAGTTGGACAAGTTGAATTCTACTACAAACAGTTCCCAGAGAACATGAGAAGCATCGCAGGGTCTCTGTTCTTCTGTGGCATGGCAGcgtcaaattattttagtacAGCACTCATCTCAGTCATCCACCATGTCACTGCTAAATCTTCAACCGGGAATTGGATACCAGAGGATCTTAACAAGGGCAGATTAGATTACTTCTACTACATGATTACTTCTCTAGAAGCTATGAATTTGGTCTACTTCCTGTTGTGTGCAAAATGGTACAAGTACAAAGGAACTAGCAGCACAAGCCTTGAACTGGACAAAGAATCAAAGCAAACTGAAAAAACAAATGCTAATGGTGTTTA 1787 0.4292 MEVEMEKKSKETIGETCDDPKIKHTGWKVMPFIIGNETFEKLGAIGTLSNLLVYLTTVFNLKNITATNIVTIFSGSTNFATLLGAFFSDTYFGRYKTIGFCTVASFVGLLIIQLTAAIKNLHPPNCGKESSTCKGPTAGQMGFLVLGLGSLLVGAAGIRPCNLAFGADQFNPNTESGKKGINSFFNWYFFTFTFAQMISLTVIIYIQSNVSWAVGLAIPAALMLISCAVFFMGAKMYVKVKPSGSPVTSIVRVIVVAIKKRKLKLPAEYPSLSLFNYMPPKSMNSKLPYTCQFRCLDKAAIMTSKDQINPDGSPIDPWSLCGMQQVEEVKCLVRVIPIWVSAIIYYLVIVQQHTLLVFQALQSDRRIGHSKFKIPGASYFVFLMLSMTLWLPIYDRIVVPFLRRLTGKEGGITVLQRMGIGMVLSTLSILLSAVVEERRRTLALTNPIGVQPRKGAISSMSGLWFIPQLALAGLAEAFTSVGQVEFYYKQFPENMRSIAGSLFFCGMAASNYFSTALISVIHHVTAKSSTGNWIPEDLNKGRLDYFYYMITSLEAMNLVYFLLCAKWYKYKGTSSTSLELDKESKQTEKTNANGV 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00439 595 CDD MFS_NPF1_2 30 568 - -
Bva05g00439 595 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 579 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva05g00439 595 SUPERFAMILY MFS general substrate transporter 43 569 IPR036259 -
Bva05g00439 595 Gene3D MFS general substrate transporter like domains 4 576 IPR036259 -
Bva05g00439 595 Pfam POT family 95 533 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva05g00439 595 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00439 Bva-Chr5 2175295 2177838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00439 15 592 Organic Solute Cotransporters AT5G62680 60.892 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00439 - - gmx:547473 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00439 05 2175295 2177838 Bva05g00439 05 2175295 2177838 ECH