Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00425 ATGAAGAGAGGTAGATTAGAAAAATTTGATGCCTTTATGTCATTAACCAGGCAAAGATTGGTTCAGATTCTGATCGGAGTTGGActtttgtatatattgttAGTCACACTGGAAATTCCATTTGTTTTCAGAACTGGGATTAGTGCTGTGTCTCACGAGTTCTTGACTCGGCCTCCTAGGCTGGAGAGCGAGGAGGACTTGGAAGTAGGAGAAGCCCCTGCTCGCCCGGtggaaaaaatttctttttacgcTAACCAACCCGCTCAGAGCCATATAACTGAGAACAAGATCTTATCGGGCTTGATCTTCGATAAAAACACATTTGATTTGAGTGGCAAAGATGGGTCCTTGGAGCTTTACAAATCAGCAAAGAATGCTTGGGAGGTGGGGAAGACGGTTTGGGAAGAGCTGGAATCGGGTAACTTGCGAACCGACGGTGACAAGTCCGAAAACCGATCAGAGTCATGCCCACGTTCGATTTCGCTATCTGGGTCTGAGTTTTTGTCTCATGGAAAAGTCATGGTCCTTCCTTGTGGACTGACATTGGGGTCCCACATAACGGTTGTGGGGATGCCGATGGCGGCGCACCGTGAGTACCAAACCGGGATATCTCTGGTGAAGGATGATGATGAACCGGTGATGGTATCACAGTTCATCATGGAGTTGCAAGGGTTGAAGACAGCCAACGGTGAGGACCCGTCTAGGATTTTGCATTTTAATCCCAGATTGAAGGGAGATTGGAATGGGAAGCCTATAATTGAGCAAAACACTTGTTATAGAATGCAGTGGGGTTCAGCACAGCGATGTGATGGTTGGAAATCAAAGGCAGCTGAAGAGACTGTTGACGGGCTGGTAAAGTGTGAGAAGTGGATACGAGATGATAACGATCATGGAGAGGAGTCTAAGGCAATATGGTGGTTAAAGAGACTAATTGGCCGGACCAAAAAAGTGACCGTCGACTGGCCATTCCCATTTTCTGAGGGCAAGTTATTTGTTCTTACCCTTAGTGCGGGATTGGAGGGTTATCATGTTAATGTTGATGGGAGGCATGTGACTTCTTTTCCTTATCGCACCGGGTTTACTCTTGAGGATGCCACTGGGCTTTATTTAAGTGGAGAAGTTGATGTCCACTCTGTGTTTGCTGCCTCATTGCCTGCATCGCATCCTAGTTTTGCCCCACAGCAGCATCTTGAATGGTCAAGAAGATGGTGTGCGCCACCACTTCCTAACTTTGTGGTAGAGCTATTTATTGGCATCCTTTCTGCTGGACACCATTTTGCTGAGCGGATGGCAGCAAGGAAGTCGTGGATGCAGCATAGGCTTATAAAGTCTACAAGAGTGGTGGCTCGTTTCTTTGTAGCGCTGCACCCTAGAAAAGAAGTGAATGTAGAATTGCAGAAGGAAGCAGAATTTTTTGGTGATGTCATTATAGTGCCTTACATGGACAACTATGACCTTGTTGTTCTGAAAACTGTTGCCATATGTGAATATGGAGTTCACACTGTTTCTGCTAAGTACATCATGAAGGGTGATGATGACACTTTTGTAAAAGTGGATGCCGTTTTAGATGCAGCTAGGAAGGTTCCCGCTGGTAGAAGCTTTTATATTGGGAACATAAATTACAACCACAAACCCTTGCGGCATGGTAAATGGGCTGTGACTTATCAGGAATGGCCAGAAGAGGATTACCCACCTTATGCTAATGGGCCGggttatattttatcttctgaCATTGCACGCAGCATTGCATCTAAATTTCAGAGGAATAGATTAAGGTTGTTTAAGATGGAAGATGTGAGTATGGGAATGTGGGTAGAGCTATTTAACAGCTCAAAACCAGTGCATTATTCGCATAGCTTACAGTTCTGCCAGTTTGGTTGCATAGAAGGCTATTACACAGCCCATTACCAATCACCAAGGCAGATGATGTGCCTGTGGGATAAATTGAAAAGGCAATCAAGGCCTAAGTGCTGCAATATGAGATG 1985 0.4433 MKRGRLEKFDAFMSLTRQRLVQILIGVGLLYILLVTLEIPFVFRTGISAVSHEFLTRPPRLESEEDLEVGEAPARPVEKISFYANQPAQSHITENKILSGLIFDKNTFDLSGKDGSLELYKSAKNAWEVGKTVWEELESGNLRTDGDKSENRSESCPRSISLSGSEFLSHGKVMVLPCGLTLGSHITVVGMPMAAHREYQTGISLVKDDDEPVMVSQFIMELQGLKTANGEDPSRILHFNPRLKGDWNGKPIIEQNTCYRMQWGSAQRCDGWKSKAAEETVDGLVKCEKWIRDDNDHGEESKAIWWLKRLIGRTKKVTVDWPFPFSEGKLFVLTLSAGLEGYHVNVDGRHVTSFPYRTGFTLEDATGLYLSGEVDVHSVFAASLPASHPSFAPQQHLEWSRRWCAPPLPNFVVELFIGILSAGHHFAERMAARKSWMQHRLIKSTRVVARFFVALHPRKEVNVELQKEAEFFGDVIIVPYMDNYDLVVLKTVAICEYGVHTVSAKYIMKGDDDTFVKVDAVLDAARKVPAGRSFYIGNINYNHKPLRHGKWAVTYQEWPEEDYPPYANGPGYILSSDIARSIASKFQRNRLRLFKMEDVSMGMWVELFNSSKPVHYSHSLQFCQFGCIEGYYTAHYQSPRQMMCLWDKLKRQSRPKCCNMR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00425 661 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 9 661 - -
Bva05g00425 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 174 380 IPR013320 -
Bva05g00425 661 Pfam Galactosyltransferase 428 606 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bva05g00425 661 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 9 661 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bva05g00425 661 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 172 382 IPR001079 GO:0030246
Bva05g00425 661 Gene3D - 411 656 - -
Bva05g00425 661 SMART Gal_bind_lectin_2 176 381 IPR001079 GO:0030246
Bva05g00425 661 Pfam Galactoside-binding lectin 173 380 IPR001079 GO:0030246
Bva05g00425 661 Gene3D - 172 380 - -
Bva05g00425 661 CDD GLECT 176 380 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00425 Bva-Chr5 2095345 2099409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00425 5 661 Glycosyltransferase AT1G74800 65.127 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00425 K20843 - rcu:8258151 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01281 06 9747726 9751316 Bva05g00425 05 2095345 2099409 ECH
Bva05g00425 05 2095345 2099409 Bva05g00425 05 2095345 2099409 ECH