Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00411 ATGCCTCCCTCTTCTGCACATCCCCAGAATTTGAAACATAGGGTATTCACGTGCCTCACCAAGCTCTCCGACCGTGATACCCTGCCGCTTGCTGCCACTGAGCTTGAGTCCATTGCTCGGAGCCTTGATCCAAGCTCTGTACCGGTATTCCTCTCATGCATATACTCCACCGACGCCTCAGACAAATCCCCAGTTCGCAAACAGTGCGTGCACCTCTTTCACGTACTTTCCGAGACTCATGGCAATTCACTCTCTCCTTACCTTTACAAAATCCTTGCCAGTATAATCCGCAGGCTCCGTGATCCGGACTCTTCCGTTCGATCCGCTTGTGTAAATTCGGTGTCGGCATTGTCGACCCACATCACCAAGCAaccgttttcttcttttctgaaGCCGTTAACAGAGGCGCTGTTCACTGAGCAGGACCACAATTCACAGATGGGTGCTGCGCTTTGTTTGGCTTCTGCCATCAATGCAGCCCCGGATCCGGACCCGGCGAGATTAGCGAAGCTCTTGCCAAGGTTTGAGAAGTTACTCAAGTGCGAGGGATTTAAGGCAAAGCCGGCGCTTTTGACACTGATCGGAAGCGTTATAGAGACTGGTGGGGCGTCGAGTCATGGGACCTTGAGTAATCTGGTTCCTTGTGTTGTAGAATTCTTGAGCAGTAAGGATTGGGCTGCAAGGAAAGCTACGGCAGAGGCATTGACCAAGTTAGCAATCGTGGAGAAGGACATGCTGTCGGAATATAAGGCTGGATGTCTGAAAGTTTTCGAAAATCGGCGATTCGATAAGGTAAAGGTTGTTCGGGAAGTTATGAATCAGATGTTGGAGGCGTGGATGCAGATTCCCGACGTTTCGGATGAATTCTCTCCACCTCCTCAATCGCATGCTTCTTCTAAAGaAAATGCTAGTGATGGGCGCTATCCACCAGTTTCCCAGAATTCATGTAGTCCTGGTTCTGTAATGTCTCAATTTCGGAGAAAATCCGTTCCGATTAGCAGATCAACTCCACTGAATAGTTCTGCTAGCAATGTTAAGAAGACGGGTCCTTTAAATGGTAATAAGAGAACGAATCCAGGTCTGTTGCAAAAGCAAAACCATAAGAATAAGGATGTTCAAATCGCTGTGCCGAATGGCTATCTTGAAGAGAGGGACGAGACGCCCCTGGAAAGAAGCAAAAAGGATGGAAGTAGATTTTCAAAGCCAGAAATGAAACGGGCTCTTTTCAGTAAAAATCCCGATGACAAAATGCTCAAGTTTGGCGGGTCAAAATCTGGATCTCGTGTGGTTCCATGTGATGAAGAGAATCAAGACTCTATTGCTCTCGGTAATGTCACTAAAGATCTCCATAGGAATCAGAAAGAGAGTGAAGAATTATCTTTAATCCGCAACCAGTTACTTCAAATTGAAAAGCAGCAGTCGAGTCTACTTGATCTTCTGCAGAAATTCATTGGAAGCTCACAGAATGGAATGCGTTCTTTGGAGAATCGTGTTCACGGCCTGGAGTTGGCATTGGATGAGATCTGCTATGATTTGGCTGTATCAAGTGGTAGGATGACGAATCCTGATGTTCCTGCTAATGCTTGTTGCCTGCTAGCTGGGGCTTTAAGCCCCAAATTTTGGAGGAAAACACAGGGTCGGCATTCATCTTCCCGGTTCTCTAGAGCTGGTGCCACCCCATCACTAGCTGCTATGCAGCATAGAGCCGACAGAATAGGCAATGCTGAAACTTTGACAAGCCACAGGGTTAGACTTCATGGTGATGGTGGGTTCATCACTAATCCACTGGCAGAGATTCGTACTAACTCAAGGGAGATACCACAGGCTGCCCGTGAGTA 1838 0.4706 MPPSSAHPQNLKHRVFTCLTKLSDRDTLPLAATELESIARSLDPSSVPVFLSCIYSTDASDKSPVRKQCVHLFHVLSETHGNSLSPYLYKILASIIRRLRDPDSSVRSACVNSVSALSTHITKQPFSSFLKPLTEALFTEQDHNSQMGAALCLASAINAAPDPDPARLAKLLPRFEKLLKCEGFKAKPALLTLIGSVIETGGASSHGTLSNLVPCVVEFLSSKDWAARKATAEALTKLAIVEKDMLSEYKAGCLKVFENRRFDKVKVVREVMNQMLEAWMQIPDVSDEFSPPPQSHASSKENASDGRYPPVSQNSCSPGSVMSQFRRKSVPISRSTPLNSSASNVKKTGPLNGNKRTNPGLLQKQNHKNKDVQIAVPNGYLEERDETPLERSKKDGSRFSKPEMKRALFSKNPDDKMLKFGGSKSGSRVVPCDEENQDSIALGNVTKDLHRNQKESEELSLIRNQLLQIEKQQSSLLDLLQKFIGSSQNGMRSLENRVHGLELALDEICYDLAVSSGRMTNPDVPANACCLLAGALSPKFWRKTQGRHSSSRFSRAGATPSLAAMQHRADRIGNAETLTSHRVRLHGDGGFITNPLAEIRTNSREIPQAARE 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00411 612 MobiDBLite consensus disorder prediction 291 366 - -
Bva05g00411 612 MobiDBLite consensus disorder prediction 383 401 - -
Bva05g00411 612 SUPERFAMILY ARM repeat 12 291 IPR016024 -
Bva05g00411 612 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 8 610 IPR033337 GO:0005874|GO:0008017
Bva05g00411 612 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 8 610 - -
Bva05g00411 612 Coils Coil 452 472 - -
Bva05g00411 612 Pfam HEAT repeat associated with sister chromatid cohesion 90 112 IPR026003 -
Bva05g00411 612 Gene3D - 7 342 IPR011989 -
Bva05g00411 612 ProSiteProfiles HEAT repeat profile. 91 129 IPR021133 -
Bva05g00411 612 MobiDBLite consensus disorder prediction 382 401 - -
Bva05g00411 612 MobiDBLite consensus disorder prediction 286 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00411 Bva-Chr5 2027641 2030524 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00411 - - gmx:100776414 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00411 05 2027641 2030524 Bva05g00411 05 2027641 2030524 ECH