Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00360 ATGAGCAATGGGGAGGGGACTCGTGAGGCCACCAGCATAGTAGCCTCTCCCGATCCGTTCGATTCGATCCCTTCGGTTCGGCAATCAGACGGTGCTGATGCTTCTCCTCCATCTTCACGGTACTCATCTTGCGGAGAGTCCGAGTTCGATCGCTATTGTAGCGCGAACTCGGTCATGGGCACCCCGAGTATGTGTAGTACTATCACAGTTTTCAACGATTTTGGATTTGGGGATGATAGTGGTTTGGAGAATTTTAGTTTAGGGGAGAGAGCTGAGATCAGTCACAAGAATCAGAGGCTTCCGACTTCTGGTGTGTCTGACAGTACGAGAGTTTTCAGCGCTGGGTCTGGCAGAGAGAACAACCAGAATCAGCAGCATCCGAAATACGGTTTCAGTGGATTAGAATTATATGATGATGACAATGACGAGCTCACGATGACTATGCTAGATACATCGAGTTTAATGGGAGTTAACCAGATAGATGAACATTTACGCCAGAATTTTGTTCATAAAGATCATGTAGAGGGGCAGAATGAGTTAGGACCCAGAGATGACGTTGAAAATCAGTCTAGTGATGGGAGTGATAATGCAGGAACTACAGAGAGGTATTTGTTGGGTGACGTGGATGAAAAGTGTTCTCAATCTGTTCAGGCAGTTGGAGAAGGTAGTTTATCTTGTGCACATGGTAGAGAGGATGAATTATATGGTTTAGACGTTCAATCTAGTTCGCAAATCTGGGAAAGGGAGGTAGAGGGGGAAGAATATGGAAACTCTTCCAATTTTGAACATTCGGAGGGTGAGAATTCAATGTACAACTATGGCAGCGACAATGACAATATAAATGAATTCCATTTGCCGAGAAATATACATTATCCCCAGGAGTTAAAAGTACAAAATGAGAATCCCCTCCTCATGAACTCTTCTACAGCCTTTGGGTCAGAAGACCTGAATGATTTACTGCTAGAAAACGAGCAAAATGCTCGAGCTTCTCATATGTTCAATGTATTTCGCAATCAGAATGAAAAGAACCCTGAAGTTGAAGATGATCGAACAAAATTCAGTTTTGTGAACTCGATGAAATTTTCTAGTCCTGGTCAAAAAGAGGAAGCTAAAGATACAAATGACACAGACATAGACCAAAAAGTTGAGGAAATAAAAGAGGTCAGGGACATTCCTGCAGCTCAAGGTACAGATAAATTGGCAAACATAGAAGAAAGTTCTTTTGATGCCTCAACTTATTTTCCAAAGATAGTCAAACCACAGAATGAAGATGAGAGGGAGGTTTATGTTGCAAAATCTCAAGTCCTAGGTGCTGAAAAATTGGTTACTTGTCCTAAAAGTTTCTCTATCGCTAAACCCTATGAAGTAGATGAGGATCCGCTGGCAGAAGAAGCTCCTTCACTCAAGACTTTAAATGCTATTGATGATGGTATCATAGAGAAAGGACACCCACGTACGAAAACCAAAGATGTTATTGGTGCGAGTGACGTTCAACATGTTGACAACCTAGTTTTgaataattctaaattaaGTTTTGATCTTGCCGCGGTTAATGAAAATTGTTCTCTTTCGGCGAAATACCTTGGAAATACAAATACAGAGCTATCTGAAAACCTTGAAAAAGATGAgccttcttcaatttttggaaGGAGGGAAACATTAGAGAGCTCTTCTGCCTCTGAAAATCTCTTTGAGAAAAATCCCGCTACTACCGAGATGGAGAATTTTGAACTAAATGAATTCTATGATGAGGTGGTCCatgaaatggaagaaattttACTAGATTCTATCAGTTCTCCTGGGGCTAGGATTGCTCAGGTTAATAGATTGATTGAACCGCAATTGTCTATACCTTTAAGAGATGGTGGATCTACGGCTTCCACTTCTGGTACAGATGATGCTTACCCACTAGTTCAGCACCCAGCTAGAATAGATGGGATCGAAGTAGTAGGTGCAAGACAGGAAAAAGGTGATGTTTCTTTTAGTGAAAGATTGGTGGGGGTGAAGGAATACACTgtgtataaaataagagtGTGGAGTGGCAAGGATCAGTGGGAGGTTGAGCGACGATATCGTGATTTTCTCACTCTCCATCGTCGGATGAAAAACTTATTCACTGAGCAAGGATGGACTTTACCTTTGCCTTGGTTTTCTGTTGAAAAAGAATCGAAGAACATATTTGGAAGTTCATCTCCTGATGTTGTTGCACATAGAAGCATTCTCATTCAAGAATGTTTACAATCCATTCTCCGTACGAGGTTTTTTTCTTGCCCTCCAGATGCACTAATTTGGTTTTTGTTCCCTCAAGATTCATATCCTAGTGCATCTGCATCAAATGCATTAGAGTCCCAGTCTTCTGTTATCACAAGGGGGCCAGACggtcaaaacttctccactttGGGGAAGACCATATCACTTAAAGTTGAAATTCAGCCtcaaaaatctataaaagaGATGTTAGAAGCACAACATTATACTTGTGCTGGATGCCATAGGCATTTTGATGATGGGAAGTCTTTAATTTGGGACTTTGCACAGACATTTGGATGGGGCAAACCTCGACTTTGTGAATACACTGGTCAATTATTCTGCTCTTCTTGCCATACAAATGAGACTGTGGTCTTGCCAGCAAGGGTTCTGCATCATTGGGATTTTACTCAATATCCAGTTTCACAGCTAGCAAAGTCTTATCTCGATTCTATACATGACCAGCCAATGCTACGCGTCACTGCAGTCAATCCCTTCCTTTTGTCAAAGGTCCCAGCCTTGCTTCATGTTATGAATGTCAGGAAAAAAATAGGGACCATGCTTCCATATGTTCGCTGCCCATTCCGCCGTTCTATCAACAGAGGACTTGGATCGCGAAGATATCTTCTGGAAAGCAACGACTTTTTCGCTCTTAGAGATCTGATTGATGTTTCCAAAGGAGCCTTTGCTGCACTCCCTGTGATGGTGGAAACTGTGTCAAAGAAAATCCTGGAACACATAACTGATCAATGCCTCATCTGCTGTGATGTGGGACTCCCATGCGGTGCCCGACAAGACTGTAGCGATCCATCTTCTCTCATTTTCCCCTTTCAGGAAGACGAGGTCAAAAGGTGTAAAAAATGCCAGTCGGTTTTCCACAATTCTTGCTTCAGAAAGCTTGGCAACTGTCCTTGCGAAGGTCACCTCAGGGTGGATGAGACAATGCGCTTAAAGGGTGTGGGTTCTGGGTTGTCCACTAGACTTTTCTCTGgattattttcaaagaaaaagccTGACAAGACTATGGAGcctaaagatgaaaatattatcttaatgGGTTCCTTGCCAAGCACTACTTTCTG 3329 0.4085 MSNGEGTREATSIVASPDPFDSIPSVRQSDGADASPPSSRYSSCGESEFDRYCSANSVMGTPSMCSTITVFNDFGFGDDSGLENFSLGERAEISHKNQRLPTSGVSDSTRVFSAGSGRENNQNQQHPKYGFSGLELYDDDNDELTMTMLDTSSLMGVNQIDEHLRQNFVHKDHVEGQNELGPRDDVENQSSDGSDNAGTTERYLLGDVDEKCSQSVQAVGEGSLSCAHGREDELYGLDVQSSSQIWEREVEGEEYGNSSNFEHSEGENSMYNYGSDNDNINEFHLPRNIHYPQELKVQNENPLLMNSSTAFGSEDLNDLLLENEQNARASHMFNVFRNQNEKNPEVEDDRTKFSFVNSMKFSSPGQKEEAKDTNDTDIDQKVEEIKEVRDIPAAQGTDKLANIEESSFDASTYFPKIVKPQNEDEREVYVAKSQVLGAEKLVTCPKSFSIAKPYEVDEDPLAEEAPSLKTLNAIDDGIIEKGHPRTKTKDVIGASDVQHVDNLVLNNSKLSFDLAAVNENCSLSAKYLGNTNTELSENLEKDEPSSIFGRRETLESSSASENLFEKNPATTEMENFELNEFYDEVVHEMEEILLDSISSPGARIAQVNRLIEPQLSIPLRDGGSTASTSGTDDAYPLVQHPARIDGIEVVGARQEKGDVSFSERLVGVKEYTVYKIRVWSGKDQWEVERRYRDFLTLHRRMKNLFTEQGWTLPLPWFSVEKESKNIFGSSSPDVVAHRSILIQECLQSILRTRFFSCPPDALIWFLFPQDSYPSASASNALESQSSVITRGPDGQNFSTLGKTISLKVEIQPQKSIKEMLEAQHYTCAGCHRHFDDGKSLIWDFAQTFGWGKPRLCEYTGQLFCSSCHTNETVVLPARVLHHWDFTQYPVSQLAKSYLDSIHDQPMLRVTAVNPFLLSKVPALLHVMNVRKKIGTMLPYVRCPFRRSINRGLGSRRYLLESNDFFALRDLIDVSKGAFAALPVMVETVSKKILEHITDQCLICCDVGLPCGARQDCSDPSSLIFPFQEDEVKRCKKCQSVFHNSCFRKLGNCPCEGHLRVDETMRLKGVGSGLSTRLFSGLFSKKKPDKTMEPKDENIILMGSLPSTTF 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00360 1109 MobiDBLite consensus disorder prediction 28 44 - -
Bva05g00360 1109 ProSiteProfiles PX domain profile. 652 772 IPR001683 GO:0035091
Bva05g00360 1109 SMART DUF4206_2 854 1061 IPR025258 -
Bva05g00360 1109 SMART PX_2 648 768 IPR001683 GO:0035091
Bva05g00360 1109 Pfam Putative zinc-RING and/or ribbon 854 1054 IPR025258 -
Bva05g00360 1109 MobiDBLite consensus disorder prediction 550 570 - -
Bva05g00360 1109 MobiDBLite consensus disorder prediction 176 190 - -
Bva05g00360 1109 MobiDBLite consensus disorder prediction 176 200 - -
Bva05g00360 1109 Pfam PX domain 678 756 IPR001683 GO:0035091
Bva05g00360 1109 Gene3D - 658 760 IPR036871 GO:0035091
Bva05g00360 1109 MobiDBLite consensus disorder prediction 538 570 - -
Bva05g00360 1109 SUPERFAMILY PX domain 664 770 IPR036871 GO:0035091
Bva05g00360 1109 CDD PX_domain 659 765 - -
Bva05g00360 1109 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 59 1107 - -
Bva05g00360 1109 MobiDBLite consensus disorder prediction 1 44 - -
Bva05g00360 1109 PANTHER DIFFERENTIALLY EXPRESSED IN FDCP 8 HOMOLOG 59 1107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00360 Bva-Chr5 1780462 1782189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00360 - - lang:109343381 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00360 05 1780462 1782189 Bva05g00360 05 1780462 1782189 ECH