Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00349 ATGACTTCAAGTATGTTGACCGGGGAGCGAAGGTGGGCCTCGTCCAGAAGAGGTGGCATGACTGTTTTAGGGAAAGTTGCTGTTCCAAAACCTATCAACCTACCCAGTCAGAGGTTAGAAAATCATGGTCTGGACCCAAATGTTGAGATTGTTCCCAAgGGTACCCTTAGTTGGGGCAGTAGATCATCTTCTTCTGCCACAAATGCATGGGGGTCTTCTTCTGTGTCTCCAAATACTGATGGAACTAGCTCACCGAGCCATCTCAGTGCTCGTCCTTCGTCCGGCGGAAGTGGCACGCGACCTTCAACTGCTGGTAGTGATAGGGCTCTTGAACCTAACCCTAATGCATGGGGGTCAACTTCTCGACCTTCATCGGCATCTGGGGCACTGACATCAAATCAGACTTCACTGACATCAATGCGTCCTCGCAGTGCAGAAACAAGACCTGGTAGTTCACAGTTGTCTCGATTTGCTGAGCCTTTGGCTGAAAATTCAGTGGCATGGAGTGCTGCTAGGACTGCTGAGAAACTGGGAGCTACACAAGCCAAGAATGATGAGTTTTCTCTGAGTTCTGGAGATTTTCCTTCTCTTGGTTCCGAGAAGGACAAGTCTGTGAAGAATTCTGAATTACAAGACCACAGTTCTCATAGTCGTCCTGGCTCATCTTCTGGAGTTGGGAAGGAGAAAACTGAGACCTCTTTTGTTGATGATGTTCCTGTGAATGCAAATGTGAAGGATGGAGCAGTTAATTCTTGGAGAAGAGATTGTCCAGTGTACAGCGAGGATGGAGAAAGGCCCAGCATAGAGAAATGGCAAGGTAATCCCCAGCCATATCCTAATGCTGGCGTTCCTCCGCCACATTATGATGCCTGGCATGGTCCTCCAGTAAACAACCCTCAGGGTGGTGTTTGGTTTAGAGGTCCTCCTGGTGGTCCTCCTTTTGGGAACCCAGTTGCTCCTGGTGGCTTTCCAATGGAACCATTTTCATATTATCGTCCCCATATTCCACCCACTGCTCTTGGCAACCCACCAGCGGTTCCCCCTCCTGCTAGTGGACCTCGAGCGCACCATCCAAAGAATGGAGATGTATACAGACCTCATATGCCCGATGCATACATTCGACCAGGTATGCCTATCAGACCTGGCTTTTATCCTGGTCCAATGGCCTATGAAGGATATTATGGTCCTCCAATGGGCTTCTGCAATTCAAATGAACGAGATGTCCCTTTTATGGGGATGGTAGCAGGGCCCCCTATTTATAATAGGTATACAAACCAAAATGCTACCGAGCATGGCAATTCACAAGGTAGAGCTGGTGGATGTGGTTCTGCTGCAAAGCCCTTGGCCTCAGAGCAAGTGGAATCTGGCCATTCTTCTAATACTAGCAGACATTATAGAGTTCTTCTGAAGCAACACAACGAATGGGATGGAAAAAATGAACCATCAAATTGGGAGGACTCTGGGACAATAATTGAATCACGTAGTGATGGAAAGGATCGACCAAGAATGCCAACCTGTGAGGATAGACAAATATCTGATTACAGGAAGAATCAAGATATGGATTTGAGGGCAAGTGCTTGTGGAGAAAAAGCTTGTTCTCAGACTCCTGAAAATCAAGGATCTAGTTCTTTGGTCATTGTAAATGCCAAGTGTCCTGAAAGTACAGGAAATATTAGGACATGTAATGATATTTCAGCAAGGAAACTGGATGGTGCTGCCTCTGATGTGCAAGTTCCATCACGGCCATCTGTCCCTAAGGATTCCAGCCTGATTCGGAAGATAGAGTGTTTAAATGCAAAAGCCCGGGACAATTCATCTGCCAAAAATAGAGTGGAGCAAAGGAGCAAGTTTCACTCCAGTAGTGTTCCAGTAAATCCTGTGGAAAATGAAGTTAGTGCTGGTGCTAGTTCTTTATTTCCTGAGAGAAACAATACCACGGAAGTCATCAATCATTTTCCTCGTGAATTGGTTGCTACTggtggagaaaaaaatattgaatccTTATCTTCCAATGGAGCACCCACATCTAGGCAAACTGCTCATGGCATGCAAGGTAGAGCTGATCGTAACAAAGGAAGATCCAATTCTAAAGATACTGATGGGTGGCGAAAGAAATCTGTAGTTGCagaaacttcaattttatcaTCTGCACAAATGGAAGCAACCAGTGTTCAGGTTGGTGATCATCATATATCTGTTGGCACCTACGACCGATTTGGGTCCTATAAGCAAGCAAGACATGATGGAGAATCTGTGCAAACCATTTCTAATCCAATTGACTGCCAAGCACAGCGTGCTGAAATGAAAGAGTTGGCCAAGCAACAGGCTAAACAAAATCaggaggaagaggaggagcggacaagaaagcaaaaggcAGAAGCTGTACAGGTTCATAGTAATGTCCCAAAGCAGAAGCAGATGGCTTATAAACAAAGGCAGAATGTTCAGGCTGAGAAAACTTCCCATGAAAAACTTTTTCCTACCCCAACTACCCTGACAGCTGAAAATGACACTTCGATTGATGTTGCTGTTTCCTCTGGGAATGTAACAAATGAAATTGGTTCAACCTGTCTTTCAGGCTTGGCCATGAATTCAAATGCTGTGGCCGAGTCTTCTGCaatccaaaaaaagaagaataatagGAATGGGAAAAGTAAGCAAAAAGTGGAAGAGACTTCATCTTTGCCAGCAATAACAAAGGAAGGCAATTTTTCCAAAAGTTCTGCTGAAAGTGATAAGCCTAAGACTTCTGAATTTGAGTTGGATCAGGACTCAGTTCAGCCAGCTTTTATTTCTAAAGATCCAAATCAGTGTTCCGAGCAGTGTAGAAATATACCTAATGAAGAATGCCATGGTAGGAACAGCCAGTGGAAATCTCAGCATTCTCGTAGGATGCCAAGAAACATGCAGATTAATAGACCGGCAGAGAAGTCCCATGGGAGTGATGCTGTGATGTGGGCCCCTGTTAAACCACAAAACAAGACTGAGATTATGGATGAATTAactgacaaaaataaaattgaggcAGTTAATTTTGTGAAGAGCGATCCGCAGGTGCATAGTAAGTTAAGAAATAAGAGGGCAGAAATGGAGAGATATGTCCCCAAACCTGttgcaaaagaaatggcccaGCATGGAAGTGTACAACAGGTGGTTTCATCAAGCAATCAGAGTGCTACTGATGAGACTGTTGGAGGGGGCGATTCTGGTTCTCATGTTGCGCACGTTGCTCGACATACTAATTCAGCTGTTGCAAAAGTGGGTTCTGGAATGGAGTATAAGAATGGAGATGGTAGACAAAGTAAGCAAGGAAAAGTGCATGGATCATGGCGGCAACGGAGTTCCACCGAATCAACTAGTAATCTGCATGATATGCAGGAAGCACTTAACCATGATTCAGATTCATATCAGAGTGTTCAGCCATCAACTGAGCACCAGTCTGAATTGAGCTCAGTGAAAGGGTCAGCGAAGCATGTTGATGATTCTAGATATGCTGATGGTCCTAACAATTCCAACAACCATGATTCAGCTGCTCGGGTTTCCACTACTGTGTCAAGAGATCAAACATCAGGTAGAGGGAGGCGAGTTCCTTTCAGAGGAAATAAGAACAATGATTTTGATCACAAAAGGGAGActgagaaaattgaaaaacaagtCTCATCCGCTGAACCTAGCCAGACAGATGCAGGTGCGGCTTTTAAGGAAAATCGAGGTGCTGGTGAACGTTTTACATCTCACTGGCAACCCAAATCTCAGCCATCTAATCATCAGCGTGGTAACAGATCCAATGAACAGAATGTTGGTCCAGAGGTTGGTCGGgtgaacaaaaacaaaaacgatTCTGCAACTCCTAGTGGTGTATCCCTTCCGACAGGCTCGGACAAGGAGACTAATGATCATGTTGTGCCGCCTCCCCGTGATCAATCAATGTCTGGAAAGACTAAGGCTGGGCCGGGTCCGCACTCAGGGAACCAAGAggcaaaaagagagagaagaaatgcTCCACCAAAGGGTCGTCCACAGTCCCCAAATCAGATACCGTTTGGCTCAGTTGAGCACGATCCATCAAGCGTGGATATTAGACATGAACAACGGCCATCATCCGGATTCCGTAAAAATGGAAACCAAAATCGTTTTGGGAGAGGACATGAATCTCGAGATTGGAAATCACCAGGGCAAGATAACAGACATTATCACCAACTTGGAAACCGGGAAAAGCAGGGGCAGAACATGCATTATGAGTATTACCCGGTTGGACCATATGATAGTAGCAAAGTGACCAGCTCTGAAAGACCGAAGGATGATAACCATAGTGGTGCAAGGTTTAGAGAGAGAGGTCAAACTCACTCAAGACGAGATGGGGGAAACTTTCATGTACGCCAGGGTGGTAGTCTTGATTa 4400 0.4348 MPRNMQINRPAEKSHGSDAVMWAPVKPQNKTEIMDELTDKNKIEAVNFVKSDPQVHSKLRNKRAEMERYVPKPVAKEMAQHGSVQQVVSSSNQSATDETVGGGDSGSHVAHVARHTNSAVAKVGSGMEYKNGDGRQSKQGKVHGSWRQRSSTESTSNLHDMQEALNHDSDSYQSVQPSTEHQSELSSVKGSAKHVDDSRYADGPNNSNNHDSAARVSTTVSRDQTSGRGRRVPFRGNKNNDFDHKRETEKIEKQVSSAEPSQTDAGAAFKENRGAGERFTSHWQPKSQPSNHQRGNRSNEQNVGPEVGRVNKNKNDSATPSGVSLPTGSDKETNDHVVPPPRDQSMSGKTKAGPGPHSGNQEAKRERRNAPPKGRPQSPNQIPFGSVEHDPSSVDIRHEQRPSSGFRKNGNQNRFGRGHESRDWKSPGQDNRHYHQLGNREKQGQNMHYEYYPVGPYDSSKVTSSERPKDDNHSGARFRERGQTHSRRDGGNFHVRQGGSLD 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00349 502 MobiDBLite consensus disorder prediction 77 502 - -
Bva05g00349 502 MobiDBLite consensus disorder prediction 234 254 - -
Bva05g00349 502 MobiDBLite consensus disorder prediction 463 492 - -
Bva05g00349 502 PANTHER PROTEIN MODIFIER OF SNC1 1 1 496 - -
Bva05g00349 502 PANTHER PROTEIN MODIFIER OF SNC1 1 1 496 IPR038808 -
Bva05g00349 502 MobiDBLite consensus disorder prediction 413 439 - -
Bva05g00349 502 MobiDBLite consensus disorder prediction 281 331 - -
Bva05g00349 502 MobiDBLite consensus disorder prediction 141 189 - -
Bva05g00349 502 MobiDBLite consensus disorder prediction 201 226 - -
Bva05g00349 502 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00349 Bva-Chr5 1722121 1730520 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00349 - - lja:Lj0g3v0308689.1 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00349 05 1722121 1730520 Bva05g00349 05 1722121 1730520 ECH