Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00348 ATGAGGAAGGCATGGCTACTGAGCCTTGCGGTCAACCTCATCTTTTTCATGGCGTTATGCGGTGCGATTGAATCTCCACAGTACGCAGTAGTTCACTTGGAGTCTGATTTCGAGATCAGACACTACAGAGAATCAGTCTGGGTTTCCGCTTCAGCTCGAGAGATTTCCTTCGAGAAGGCTACCATAAATGGCTTCCACAGGTTGTTCCAGTACATAATGGGTGCCAACCTGAACTTCTCAAGAATTGCAATGACGGTTCCCGTGTTGACAAGCATAGTCCCCGGAGCAGGCCCCTTTCACTCATCAGGTTACTTTGTTAGTTTCTACTTGCCTGTGAAGTTCCAAGCTACACCTCCACTCCCACTCCCAGAACTGAACCTCAAGCCCTGTGCATCTCACGGCCGCTGCGTTGCAGTGAGAAAGTTCTCCGGATTTGCGAGGGATGACAACATTGTACAAGAGGCAGAGAAGCTTGCTTTCAGCTTGAGTAGATCTCCATGGGCAAATTCAACATCTTCCAAGACTCAGCATGGTTATTCAATTGCACAGTACAATTCTCCATTTCGGCTCATTGGGCGTACAAATGAGGTTTGGGTGGATATTGATGCGCTTGAACTAGATGATTGTAAATCAGTCACTGTTGCTGCATATTG 653 0.4747 MRKAWLLSLAVNLIFFMALCGAIESPQYAVVHLESDFEIRHYRESVWVSASAREISFEKATINGFHRLFQYIMGANLNFSRIAMTVPVLTSIVPGAGPFHSSGYFVSFYLPVKFQATPPLPLPELNLKPCASHGRCVAVRKFSGFARDDNIVQEAEKLAFSLSRSPWANSTSSKTQHGYSIAQYNSPFRLIGRTNEVWVDIDALELDDCKSVTVAAY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00348 217 SUPERFAMILY Probable bacterial effector-binding domain 14 201 IPR011256 -
Bva05g00348 217 PANTHER HEME-BINDING PROTEIN-RELATED 11 210 IPR006917 -
Bva05g00348 217 Pfam SOUL heme-binding protein 23 199 IPR006917 -
Bva05g00348 217 Gene3D Regulatory factor, effector binding domain 22 208 IPR011256 -
Bva05g00348 217 PANTHER SOUL HEME-BINDING PROTEIN-RELATED 11 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00348 Bva-Chr5 1719770 1721687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00348 - - zju:107418429 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01388 06 10281145 10282340 Bva05g00348 05 1719770 1721687 ECH
Bva05g00348 05 1719770 1721687 Bva05g00348 05 1719770 1721687 ECH