Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00347 ATGGCAATGCGTTTGTGCCCAAGTTTTGTAAATCCATTGGTTGCTTCAAACCTTTGCTTCAGAACCTCTCGCCCAATATGCAAATTTTCCATTTGCAGCCATATGGTGGACTCCAACAAATCGCGCAAGCTGGTTCTGGCAGTAAAGGAGAAGCTTGAAAAGGAACACCGAAACCTCCCTGTAGGTAAAAATGGAAGAGATGACGAAGATATGATATTCTGGTTTCTCAAAGATCGCAAATTTTCCGTTGAAGATGCTGTTTCAAAGCTTACTAAAGCCATTAAATGGCGTCAAGAATTTGGTGTATCTGAATTGTCTGAAGAAGACGTCAAAGATGTAGCTCAAACTGGAAAAGCATACGTACACGACTGTCTAGATGTCAATAATAGACCCGTGCTTGTGGTGGTGGGATCAAAGCATTTCCCAGAGGCACAAGATCCGGCTGAGGATGAGAAGTTGTGTATTTTCCTTGTTGAGAAGGCATTGAGTAAGCTTCCAACGGGGCAGGAACAGATACTTGGAATAGTTGATCTCAGGGGTTTCGGCACAGAAAATGCGGATCTTAGATACTTGACAttcttgTTTGACgtattctattattattatccaaAGCGATTGGCCGAAGTGCTCTTTGTTGAAGCTCCTTTCGTGTTTAAGCCAATTTGGCAACTAGTCAAGCCGATGTTAAAATCGTATGCTTCTCTGacGAAATTTTGCTCTGCAGACAGTGTCAGGAAGGAATATTTTACAGATGAAACAGTTCCAATCAGCTTTAGGGATTG 782 0.4105 MAMRLCPSFVNPLVASNLCFRTSRPICKFSICSHMVDSNKSRKLVLAVKEKLEKEHRNLPVGKNGRDDEDMIFWFLKDRKFSVEDAVSKLTKAIKWRQEFGVSELSEEDVKDVAQTGKAYVHDCLDVNNRPVLVVVGSKHFPEAQDPAEDEKLCIFLVEKALSKLPTGQEQILGIVDLRGFGTENADLRYLTFLFDVFYYYYPKRLAEVLFVEAPFVFKPIWQLVKPMLKSYASLTKFCSADSVRKEYFTDETVPISFRD 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00347 260 CDD SEC14 126 231 IPR001251 -
Bva05g00347 260 Pfam CRAL/TRIO domain 115 232 IPR001251 -
Bva05g00347 260 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 109 260 IPR001251 -
Bva05g00347 260 SMART sec14_4 113 258 IPR001251 -
Bva05g00347 260 SUPERFAMILY CRAL/TRIO N-terminal domain 44 109 IPR036273 -
Bva05g00347 260 SUPERFAMILY CRAL/TRIO domain 108 248 IPR036865 -
Bva05g00347 260 Gene3D - 27 257 IPR036865 -
Bva05g00347 260 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 26 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00347 Bva-Chr5 1716227 1718732 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00347 - - vvi:100263783 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00347 05 1716227 1718732 Bva05g00347 05 1716227 1718732 ECH