Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00345 ATGGACATGAAGGGATATTCAGGTTGCTGGACAAAACGTAGGAATGAGCTATTTTTTGCAGCTCGGCACACAAGAAGACAACACCAATGCATACAAGCAAGTCCTGTCGCCCCAGAAAAAACAGTTGCACAAAATCATTCTCTAAAAATGGCTGCTGCTATTTCCCAAAATGCTCTTCCTGTGTTGCCTATATTTGTTGCTTTGCTTCTACTTGTTACTTCAATTAGCCCAGTCCTGTCCATCCACATTTTCCCAGATTCCGGCCATCGTTCACCGGCCAATCAGACTTTTAGACCAGAAGCAGAGTTGCTCAAGTTGAGGAGAATCAGAGCTCATCTAAAGAGGATCAACAAGCCTGCTGTCAAGACAATTAAGAGCCCTGATGGGGATTTGATTGATTGTGTTTTATCTCATCAGCAACCAGCTTTTGACCATCCTCAGCTTAAAGGGCAAAGACCATTGGATCCACCAGAGAGGCCAAAAGGCTATAGCAACAGGGAAACTGTAGAAGAGAGCCTTCAGCTATGGACAGATTCTGGTGAATCGTGCCCAGAAGGAACTGTTCCTATACGAAAAACAACAGAGGAAGACATTCTAAGAGCAAGTTCAATCCGAAGATTTGGAAGAAAACCAAGAAATGTACGGAGAGACTCAACCGGCAGTGGCCATGAGCATGCAGTTGTTTTTGTAAATGGAGATCAATACTATGGAGCAAAGGCAAGCATAAATGTATGGACACCCCTGGTAACAGATCAATATGAATTCAGCTTGTCACAAATATGGGTTATTGCGGGTTCATTTGGCAATGATCTCAACACCATAGAAGCTGGTTGGCAGGTGAGCCCAGAGCTATATGGAGACAACTATCCTAGGTTCTTCACTTATTGGACAACAGACGCGTATCAAGCCACTGGATGCTACAACTTGCTCTGCTCAGGTTTTATCCAAACTAACAACAAGGTAGCAATAGGAGCAGCGATTTCCCCAAGATCCGCTTATAACGGCAGACAATTCGATATTGGCTTAATGGTTTGGAAGGATCCGAAACATGGACATTGGTGGCTAGAGTTCGGGTCGGGTCTACTAGTTGGGTACTGGCCAGCATTCTTGTTTAGTCACTTGAGAAGTCATGCAAGCATGGTGCAATTTGGAGGAGAAATTGTGAATTCTCGTTCAAGGGGTTACCACACAGGCACCCAAATGGGCAGTGGACATTTTGCAGAAGAGGGATTTGAAAAAGCAGCGTATTTTAGAAACTTGCAAGTTGTTGATTGGGATAATAACTTGCTTCCTCTAACAAATATTCACCAGTTAGCAGATCATCCAAATTGCTATGACATAAGACAAGGGAGGAACAATGTTTGGGGAACTTATTTCTATTATGGAGGTCCTGGAAGGAATGTCAGATGcccatg 1415 0.4346 MDMKGYSGCWTKRRNELFFAARHTRRQHQCIQASPVAPEKTVAQNHSLKMAAAISQNALPVLPIFVALLLLVTSISPVLSIHIFPDSGHRSPANQTFRPEAELLKLRRIRAHLKRINKPAVKTIKSPDGDLIDCVLSHQQPAFDHPQLKGQRPLDPPERPKGYSNRETVEESLQLWTDSGESCPEGTVPIRKTTEEDILRASSIRRFGRKPRNVRRDSTGSGHEHAVVFVNGDQYYGAKASINVWTPLVTDQYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFIQTNNKVAIGAAISPRSAYNGRQFDIGLMVWKDPKHGHWWLEFGSGLLVGYWPAFLFSHLRSHASMVQFGGEIVNSRSRGYHTGTQMGSGHFAEEGFEKAAYFRNLQVVDWDNNLLPLTNIHQLADHPNCYDIRQGRNNVWGTYFYYGGPGRNVRCP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00345 471 MobiDBLite consensus disorder prediction 167 181 - -
Bva05g00345 471 Pfam Neprosin activation peptide 123 228 IPR025521 -
Bva05g00345 471 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 41 471 - -
Bva05g00345 471 Pfam Neprosin 253 464 IPR004314 -
Bva05g00345 471 MobiDBLite consensus disorder prediction 142 188 - -
Bva05g00345 471 MobiDBLite consensus disorder prediction 151 166 - -
Bva05g00345 471 Gene3D - 247 358 - -
Bva05g00345 471 PANTHER CARBOXYL-TERMINAL PEPTIDASE 41 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00345 Bva-Chr5 1705678 1708868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00345 - - gmx:100782442 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01391 06 10289302 10292667 Bva05g00345 05 1705678 1708868 ECH
Bva05g00345 05 1705678 1708868 Bva05g00345 05 1705678 1708868 ECH